RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	RPIA	P49247	311 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	IL10RB	Q08334	325 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	PRKG2	Q13237	762 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ZNF605	Q86T29	641 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	NPLOC4	Q8TAT6	608 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ANKZF1	Q9H8Y5	726 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	TLR9	Q9NR96	1032 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	FCF1	Q9Y324	198 aa	Known RBP	15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	MYL12B	O14950	172 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	MAT2A	P31153	395 aa	Known RBP	15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	DHPS	P49366	369 aa	Predicted RBP	15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	KPNB1	Q14974	876 aa	Known RBP	15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	C2orf27A	Q580R0	203 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ZFP1	Q6P2D0	407 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	HDAC7	Q8WUI4	952 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ZNF607	Q96SK3	696 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	RIBC2	Q9H4K1	309 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	XPNPEP1	Q9NQW7	623 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	LZTS1	Q9Y250	596 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	MFSD11	O43934	449 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	FAM153B	P0C7A2	387 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	HK2	P52789	917 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	FAM153C	Q494X1	144 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	CERCAM	Q5T4B2	595 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	KLHL32	Q96NJ5	620 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ABCB8	Q9NUT2	735 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532		A0A1W2PQ45	241 aa	Predicted RBP	15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532		A0A1W2PQY0	241 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	LIPM	Q5VYY2	423 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ARC	Q7LC44	396 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	CELF5	Q8N6W0	485 aa	Known RBP	15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ACD	Q96AP0	544 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	PANX1	Q96RD7	426 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	NOD2	Q9HC29	1040 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ANAPC2	Q9UJX6	822 aa		15.72	■□□□□ 0.11
NCAPD3-213	ENST00000534532	MATN3	O15232	486 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	PRAMEF1	O95521	474 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	HNRNPH3	P31942	346 aa	Known RBP	15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	INO80D	Q53TQ3	878 aa	Predicted RBP	15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	CFAP206	Q8IYR0	622 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	HMGB4	Q8WW32	186 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ACSS3	Q9H6R3	686 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	SNX15	Q9NRS6	342 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	SORCS3	Q9UPU3	1222 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	TM7SF2	O76062	418 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	UBOX5	O94941	541 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	MANF	P55145	182 aa	Known RBP	15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	DSC2	Q02487	901 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	CYP2R1	Q6VVX0	501 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	TMPRSS11B	Q86T26	416 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	TRMO	Q9BU70	441 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ABCG8	Q9H221	673 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	TPRKB	Q9Y3C4	175 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	RAP2C	Q9Y3L5	183 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	MFHAS1	Q9Y4C4	1052 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	LYVE1	Q9Y5Y7	322 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	HEBP2	Q9Y5Z4	205 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	SNRPB2	P08579	225 aa	Known RBP	15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	BMP7	P18075	431 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	DRG2	P55039	364 aa	Known RBP	15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	C9orf64	Q5T6V5	341 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	LMLN	Q96KR4	655 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	TEKT5	Q96M29	485 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	PCDHB18P	Q96TA0	734 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	BTBD10	Q9BSF8	475 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	IKZF4	Q9H2S9	585 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	CREBZF	Q9NS37	354 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	BTRC	Q9Y297	605 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	NR2E1	Q9Y466	385 aa		15.71	■□□□□ 0.11
NCAPD3-213	ENST00000534532	MAGEA13P	A6NCF6	341 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FAM25A	B3EWG3	89 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FAM25C	B3EWG5	89 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	FAM25G	B3EWG6	89 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	CCNYL3	P0C7X3	344 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TPSB2	P20231	275 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	ITPKA	P23677	461 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	VARS	P26640	1264 aa	Known RBP	15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	BUD31	P41223	144 aa	Predicted RBP	15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	GSS	P48637	474 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	MASP1	P48740	699 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	LAPTM5	Q13571	262 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TPSAB1	Q15661	275 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	EIF3M	Q7L2H7	374 aa	Known RBP	15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TERB1	Q8NA31	727 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	BRSK1	Q8TDC3	778 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SUSD3	Q96L08	255 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SLC9A7	Q96T83	725 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	C9orf16	Q9BUW7	83 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	PCDHGC4	Q9Y5F7	938 aa		15.71	■□□□□ 0.1
NCAPD3-213	ENST00000534532	IRAK2	O43187	625 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	STX11	O75558	287 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	NUP62	P37198	522 aa	Predicted RBP	15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	LRRC32	Q14392	662 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	DLG2	Q15700	870 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TMEM164	Q5U3C3	297 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SERHL2	Q9H4I8	314 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	SERHL	Q9NQF3	203 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	PDP2	Q9P2J9	529 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	OR6B1	O95007	311 aa		15.7	■□□□□ 0.1
NCAPD3-213	ENST00000534532	TPP2	P29144	1249 aa	Predicted RBP	15.7	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms