RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 KCNK4Q9NYG8 393 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 SPTBN1Q01082 2364 aaKnown RBP14.91□□□□□ -0.02
CTSB-230ENST00000534149 TCRBV5S1A1TA0A578 114 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 TTC24A2A3L6 582 aaPredicted RBP14.91□□□□□ -0.02
CTSB-230ENST00000534149 GOLGA6CA6NDK9 693 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 GOLGA6BA6NDN3 693 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 DFFAO00273 331 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 GOLGA6DP0CG33 693 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 ADCY8P40145 1251 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 POLD2P49005 469 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 CDC20Q12834 499 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 BECN1Q14457 450 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 NCAPHQ15003 741 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 TCP11X2Q5H9J9 407 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 DCAF12Q5T6F0 453 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 DOK6Q6PKX4 331 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 MON1BQ7L1V2 547 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 ZNF761Q86XN6 746 aaPredicted RBP14.91□□□□□ -0.02
CTSB-230ENST00000534149 ARHGAP12Q8IWW6 846 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 UNC5BQ8IZJ1 945 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 CNPY3Q9BT09 278 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 GPN2Q9H9Y4 310 aaPredicted RBP14.91□□□□□ -0.02
CTSB-230ENST00000534149 SEPT11Q9NVA2 429 aaKnown RBP14.91□□□□□ -0.02
CTSB-230ENST00000534149 GOLGA6AQ9NYA3 693 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 DONSONQ9NYP3 566 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 PILRAQ9UKJ1 303 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 AP4E1Q9UPM8 1137 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 MAN2B2Q9Y2E5 1009 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 PLEKHM1Q9Y4G2 1056 aa14.91□□□□□ -0.02
CTSB-230ENST00000534149 UTP20O75691 2785 aaKnown RBP14.9□□□□□ -0.02
CTSB-230ENST00000534149 LOC101059948A0A1B0GTJ6 334 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 ANKRD62A6NC57 917 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 B4E171 279 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 EEF2KO00418 725 aaKnown RBP14.9□□□□□ -0.02
CTSB-230ENST00000534149 HEXIM1O94992 359 aaKnown RBP14.9□□□□□ -0.02
CTSB-230ENST00000534149 VIPR1P32241 457 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 HTR7P34969 479 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 ETV3P41162 512 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 TSPAN7P41732 249 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 ACTR1BP42025 376 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 PPM1FP49593 454 aaPredicted RBP14.9□□□□□ -0.02
CTSB-230ENST00000534149 RAB15P59190 212 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 ACTR1AP61163 376 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 AP1S1P61966 158 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 OGDHQ02218 1023 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 NSUN2Q08J23 767 aaKnown RBP eCLIP14.9□□□□□ -0.02
CTSB-230ENST00000534149 SQSTM1Q13501 440 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 CA9Q16790 459 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 RAET1GQ6H3X3 334 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 TMEM71Q6P5X7 295 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 HSD11B1LQ7Z5J1 315 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 NPWQ8N729 165 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 BMPERQ8N8U9 685 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 PDCD6IPQ8WUM4 868 aaKnown RBP14.9□□□□□ -0.02
CTSB-230ENST00000534149 DTD2Q96FN9 168 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 CTRCQ99895 268 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 DPYSL5Q9BPU6 564 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 DHX35Q9H5Z1 703 aaKnown RBP14.9□□□□□ -0.02
CTSB-230ENST00000534149 PLAAQ9Y263 795 aa14.9□□□□□ -0.02
CTSB-230ENST00000534149 NOTCH2Q04721 2471 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 A8MU76 341 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 CAPN5O15484 640 aaPredicted RBP14.89□□□□□ -0.03
CTSB-230ENST00000534149 IVLP07476 585 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 LHCGRP22888 699 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 ERCC5P28715 1186 aaPredicted RBP14.89□□□□□ -0.03
CTSB-230ENST00000534149 OAS2P29728 719 aaKnown RBP14.89□□□□□ -0.03
CTSB-230ENST00000534149 UBE2HP62256 183 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 GPLD1P80108 840 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 RFTN1Q14699 578 aaPredicted RBP14.89□□□□□ -0.03
CTSB-230ENST00000534149 DEFB109BQ30KR1 87 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 SNAP47Q5SQN1 464 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 PPP1R15BQ5SWA1 713 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 NLGN4XQ8N0W4 816 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 FAM26EQ8N5C1 309 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 NLGN4YQ8NFZ3 816 aaPredicted RBP14.89□□□□□ -0.03
CTSB-230ENST00000534149 KIAA1143Q96AT1 154 aaPredicted RBP14.89□□□□□ -0.03
CTSB-230ENST00000534149 RTP4Q96DX8 246 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 ABHD17AQ96GS6 310 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 AHCYL2Q96HN2 611 aaKnown RBP14.89□□□□□ -0.03
CTSB-230ENST00000534149 SLC17A4Q9Y2C5 497 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 PCDHGC4Q9Y5F7 938 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 ICE1Q9Y2F5 2266 aa14.89□□□□□ -0.03
CTSB-230ENST00000534149 TRBV23OR9-2A0A075B6M9 112 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 DAPK3O43293 454 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 HTRA2O43464 458 aaPredicted RBP14.88□□□□□ -0.03
CTSB-230ENST00000534149 CPP00450 1065 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 ERCC2P18074 760 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 EEF1GP26641 437 aaKnown RBP14.88□□□□□ -0.03
CTSB-230ENST00000534149 IL10RBQ08334 325 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 SLC10A7Q0GE19 358 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 PEX6Q13608 980 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 LBRQ14739 615 aaKnown RBP14.88□□□□□ -0.03
CTSB-230ENST00000534149 PTPRRQ15256 657 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 SYCP1Q15431 976 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 LACTB2Q53H82 288 aaPredicted RBP14.88□□□□□ -0.03
CTSB-230ENST00000534149 ATP1A1-AS1Q5TC04 95 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 DCUN1D2Q6PH85 259 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 RFX8Q6ZV50 586 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 Q6ZVL8 140 aa14.88□□□□□ -0.03
CTSB-230ENST00000534149 TIPARPQ7Z3E1 657 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms