RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 IFI16Q16666 785 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 ALG1LQ6GMV1 187 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 ZCCHC8Q6NZY4 707 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 MARK2Q7KZI7 788 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 RFX6Q8HWS3 928 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 TMEM139Q8IV31 216 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 CCDC13Q8IYE1 715 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 GALNT15Q8N3T1 639 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 SDR16C5Q8N3Y7 309 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 PAF1Q8N7H5 531 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 LPCAT1Q8NF37 534 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 MAPK15Q8TD08 544 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 SPOCK2Q92563 424 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 IQCDQ96DY2 449 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 RNF31Q96EP0 1072 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 SCRN2Q96FV2 425 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 AGAP3Q96P47 875 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 TRIB3Q96RU7 358 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 CCDC3Q9BQI4 270 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 GORASP1Q9BQQ3 440 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 RIOK2Q9BVS4 552 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 HEMGNQ9BXL5 484 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 TDRD1Q9BXT4 1180 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 FRMD8Q9BZ67 464 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 SLC13A1Q9BZW2 595 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 RCOR3Q9P2K3 495 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 SPASTQ9UBP0 616 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 TMPRSS11EQ9UL52 423 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 PHTF1Q9UMS5 762 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 GPR34Q9UPC5 381 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 PPIL1Q9Y3C6 166 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 PCDHA13Q9Y5I0 950 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 ENTPD2Q9Y5L3 495 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 AK5Q9Y6K8 562 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 CSNK1G3Q9Y6M4 447 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 RNF215Q9Y6U7 377 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.61□□□□□ -0.87
SSBP3-215ENST00000533946 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 B4DGG1 531 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 GPR39O43194 453 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 B4GAT1O43505 415 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 SOCS5O75159 536 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 LCA5LO95447 670 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 FGF1P05230 155 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 ANXA6P08133 673 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 PTMSP20962 102 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 SERPINB6P35237 376 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 CHRNA4P43681 627 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 GNPDA1P46926 289 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 PEX5P50542 639 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 RENBPP51606 427 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 SUOXP51687 545 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 STC1P52823 247 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 CDK3Q00526 305 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 AP1B1Q10567 949 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 WASHC5Q12768 1159 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 TRIM14Q14142 442 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 PTK2BQ14289 1009 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 GRM3Q14832 879 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 NR0B2Q15466 257 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 PCSK7Q16549 785 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 ISXQ2M1V0 245 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 KHDC1Q4VXA5 237 aaKnown RBP9.61□□□□□ -0.87
SSBP3-215ENST00000533946 ARMC12Q5T9G4 340 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 SPOCD1Q6ZMY3 1216 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 LYSMD3Q7Z3D4 306 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 ZNF761Q86XN6 746 aaPredicted RBP9.61□□□□□ -0.87
SSBP3-215ENST00000533946 FAM46DQ8NEK8 389 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 GPR156Q8NFN8 814 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 OR56A4Q8NGH8 313 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 TPCN2Q8NHX9 752 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 TADA1Q96BN2 335 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 HDAC11Q96DB2 347 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 DESI2Q9BSY9 194 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 TEX101Q9BY14 249 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 POLR1EQ9GZS1 481 aaKnown RBP9.61□□□□□ -0.87
SSBP3-215ENST00000533946 SYNDIG1Q9H7V2 258 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 CARS2Q9HA77 564 aaKnown RBP9.61□□□□□ -0.87
SSBP3-215ENST00000533946 ZNHIT6Q9NWK9 470 aaKnown RBP9.61□□□□□ -0.87
SSBP3-215ENST00000533946 PADI4Q9UM07 663 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 SUFUQ9UMX1 484 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 SATB2Q9UPW6 733 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 SHOC2Q9UQ13 582 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 PIEZO2Q9H5I5 2752 aa9.61□□□□□ -0.87
SSBP3-215ENST00000533946 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 PRSS38A1L453 326 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 NEMP2A6NFY4 417 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 H3BM21 787 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 BUD23O43709 281 aaKnown RBP9.6□□□□□ -0.87
SSBP3-215ENST00000533946 CST8O60676 142 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 TNFP01375 233 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 SLC4A1P02730 911 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 TPM3P06753 285 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 KRT7P08729 469 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 CTSEP14091 401 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms