RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 BAHD1Q8TBE0 780 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-227ENST00000533909 SCG3Q8WXD2 468 aaKnown RBP13.37□□□□□ -0.27
CAPN1-227ENST00000533909 TSACCQ96A04 125 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-227ENST00000533909 SMIM14Q96QK8 99 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 SRPK1Q96SB4 655 aaKnown RBP13.37□□□□□ -0.27
CAPN1-227ENST00000533909 HERPUD2Q9BSE4 406 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 GPR63Q9BZJ6 419 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 NLGN3Q9NZ94 848 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 PKD2L2Q9NZM6 624 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 CD84Q9UIB8 345 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 PPP2R2CQ9Y2T4 447 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 ACACBO00763 2458 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 LRRK1Q38SD2 2015 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 A0A0U1RQS6 177 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 SCAMP1O15126 338 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 SIGLEC6O43699 453 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 ANXA9O76027 345 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 TNFP01375 233 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 ANXA6P08133 673 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 MYCLP1P12525 358 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-227ENST00000533909 PMLP29590 882 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 HK3P52790 923 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 STC1P52823 247 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 WNT3AP56704 352 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 SRP54P61011 504 aaKnown RBP13.36□□□□□ -0.27
CAPN1-227ENST00000533909 MPP3Q13368 585 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 IHHQ14623 411 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 ELOCQ15369 112 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 ARHGEF18Q6ZSZ5 1173 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 NRSN1Q8IZ57 195 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 RBFAQ8N0V3 343 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 FSTL5Q8N475 847 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-227ENST00000533909 IPMKQ8NFU5 416 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 OR56A4Q8NGH8 313 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 GLMNQ92990 594 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 FUBP1Q96AE4 644 aaKnown RBP13.36□□□□□ -0.27
CAPN1-227ENST00000533909 PPP1R2P1Q96PQ5 205 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 FCRL5Q96RD9 977 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 C10orf88Q9H8K7 445 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 ZFYVE1Q9HBF4 777 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 NCKIPSDQ9NZQ3 722 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 CSNK1G3Q9Y6M4 447 aa13.36□□□□□ -0.27
CAPN1-227ENST00000533909 TDRD6O60522 2096 aaKnown RBP13.36□□□□□ -0.27
CAPN1-227ENST00000533909 TPRP12270 2363 aaKnown RBP13.36□□□□□ -0.27
CAPN1-227ENST00000533909 RGSL1A5PLK6 1076 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 K7ESM1 405 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 TRIM38O00635 465 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 ZSCAN12O43309 604 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 HOXC4P09017 264 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-227ENST00000533909 C1SP09871 688 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 PIRTP0C851 137 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 CDK4P11802 303 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 CKMT2P17540 419 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 GM2AP17900 193 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-227ENST00000533909 DUSP3P51452 185 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-227ENST00000533909 GEMP55040 296 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 PTSQ03393 145 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 DNAJC3Q13217 504 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 C1orf61Q13536 156 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 TCEA2Q15560 299 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 ALG11Q2TAA5 492 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 DEFB133Q30KQ1 61 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 MEI1Q5TIA1 1274 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 DOK6Q6PKX4 331 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 ZNF765Q7L2R6 523 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 KANSL1Q7Z3B3 1105 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 TECPR1Q7Z6L1 1165 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 SLC25A41Q8N5S1 370 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 SCAMP4Q969E2 229 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 TRIB3Q96RU7 358 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 LYSMD1Q96S90 227 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 LRRC61Q9BV99 259 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 RIOK2Q9BVS4 552 aaKnown RBP13.35□□□□□ -0.27
CAPN1-227ENST00000533909 ABCG8Q9H221 673 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 GBA3Q9H227 469 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 FAM83DQ9H4H8 585 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 SUDS3Q9H7L9 328 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-227ENST00000533909 MAGEE1Q9HCI5 957 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 CYP4F12Q9HCS2 524 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 RAD18Q9NS91 495 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 KLF15Q9UIH9 416 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 SHOC2Q9UQ13 582 aa13.35□□□□□ -0.27
CAPN1-227ENST00000533909 AAR2Q9Y312 384 aaKnown RBP13.35□□□□□ -0.27
CAPN1-227ENST00000533909 GOLGA4Q13439 2230 aaKnown RBP13.35□□□□□ -0.27
CAPN1-227ENST00000533909 TMEM202A6NGA9 273 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 LMO7DNF2Z398 122 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 TNFRSF10CO14798 259 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 HYAL3O43820 417 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-227ENST00000533909 RFPL3O75679 317 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 EPOP01588 193 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 TRIM23P36406 574 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 RPIAP49247 311 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 DPTQ07507 201 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 ANKRD20A2Q5SQ80 823 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 ANKRD20A1Q5TYW2 823 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 ANKRD20A3Q5VUR7 823 aa13.34□□□□□ -0.27
CAPN1-227ENST00000533909 ZCCHC8Q6NZY4 707 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms