RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SPTLC3Q9NUV7 552 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 CHKBQ9Y259 395 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 A0A0J9YYE9 177 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 LRRD1A4D1F6 860 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 B4DGG1 531 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 TMX2-CTNND1H3BSU7 103 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 NTN3O00634 580 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-211ENST00000533492 FZD6O60353 706 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 MFAP3LO75121 409 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 TRBC1P01850 177 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 HOXB3P14651 431 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-211ENST00000533492 GLB1P16278 677 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 ZNF30P17039 623 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 CCL7P80098 99 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 CDK3Q00526 305 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 LRRC66Q68CR7 880 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 OGFOD3Q6PK18 319 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 TECPR1Q7Z6L1 1165 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 RHOT2Q8IXI1 618 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 CCDC13Q8IYE1 715 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 CCL4L1Q8NHW4 92 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 WDR36Q8NI36 951 aaKnown RBP15.42■□□□□ 0.06
CPSF1-211ENST00000533492 KIAA1524Q8TCG1 905 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 AP2M1Q96CW1 435 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 HDAC11Q96DB2 347 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 GSDMCQ9BYG8 508 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 DTLQ9NZJ0 730 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 CD84Q9UIB8 345 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 RABGEF1Q9UJ41 708 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 DNPEPQ9ULA0 475 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 HEY1Q9Y5J3 304 aa15.42■□□□□ 0.06
CPSF1-211ENST00000533492 CCDC187A0A096LP49 1063 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 A0A0U1RQS6 177 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 EIF4E1BA6NMX2 242 aaKnown RBP15.41■□□□□ 0.06
CPSF1-211ENST00000533492 CASC3O15234 703 aaKnown RBP15.41■□□□□ 0.06
CPSF1-211ENST00000533492 JCHAINP01591 159 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 RPLP0P05388 317 aaKnown RBP15.41■□□□□ 0.06
CPSF1-211ENST00000533492 HLA-DQB2P05538 268 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 CEACAM5P06731 702 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 TEAD1P28347 426 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 GNPDA1P46926 289 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 DPTQ07507 201 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 ILF3Q12906 894 aaKnown RBP eCLIP15.41■□□□□ 0.06
CPSF1-211ENST00000533492 SLC10A2Q12908 348 aaPredicted RBP15.41■□□□□ 0.06
CPSF1-211ENST00000533492 C14orf28Q4W4Y0 310 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 BROXQ5VW32 411 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 ALG1LQ6GMV1 187 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 CNGA4Q8IV77 575 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 SPACA3Q8IXA5 215 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 ARL14Q8N4G2 192 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 Q8N9G6 341 aaPredicted RBP15.41■□□□□ 0.06
CPSF1-211ENST00000533492 ARRDC2Q8TBH0 407 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 SLC46A1Q96NT5 459 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 STRADBQ9C0K7 418 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 ABCG8Q9H221 673 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 LRRN3Q9H3W5 708 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 PCDH9Q9HC56 1237 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 LRIT1Q9P2V4 623 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 SUFUQ9UMX1 484 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 PCDHGA8Q9Y5G5 932 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 UNC13CQ8NB66 2214 aa15.41■□□□□ 0.06
CPSF1-211ENST00000533492 AKR1B15C9JRZ8 316 aaPredicted RBP15.4■□□□□ 0.06
CPSF1-211ENST00000533492 APOL1O14791 398 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 NOBOXO60393 691 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 PYGLP06737 847 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 TNNT1P13805 278 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 RPL26P61254 145 aaKnown RBP15.4■□□□□ 0.06
CPSF1-211ENST00000533492 PTSQ03393 145 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 NIPAL4Q0D2K0 466 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 BIRC2Q13490 618 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 PEX6Q13608 980 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 SOWAHCQ53LP3 525 aaPredicted RBP15.4■□□□□ 0.06
CPSF1-211ENST00000533492 CERCAMQ5T4B2 595 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 DOK6Q6PKX4 331 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 IGF2-ASQ6U949 168 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 RFLNAQ6ZTI6 216 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 CCNJLQ8IV13 435 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 LPCAT1Q8NF37 534 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 GPBAR1Q8TDU6 330 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 KCNE4Q8WWG9 221 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 HIC2Q96JB3 615 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 TMEM74Q96NL1 305 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 SMIM14Q96QK8 99 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 TDRD1Q9BXT4 1180 aaKnown RBP15.4■□□□□ 0.06
CPSF1-211ENST00000533492 FRMD8Q9BZ67 464 aaPredicted RBP15.4■□□□□ 0.06
CPSF1-211ENST00000533492 EPB41L5Q9HCM4 733 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 ASCL3Q9NQ33 180 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 TRNAU1APQ9NX07 287 aaKnown RBP15.4■□□□□ 0.06
CPSF1-211ENST00000533492 APPL1Q9UKG1 709 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 RPL26L1Q9UNX3 145 aaKnown RBP15.4■□□□□ 0.06
CPSF1-211ENST00000533492 ARHGEF17Q96PE2 2063 aaPredicted RBP15.4■□□□□ 0.06
CPSF1-211ENST00000533492 KIF26BQ2KJY2 2108 aa15.4■□□□□ 0.06
CPSF1-211ENST00000533492 A0A1W2PQM1 296 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 CAPN8A6NHC0 703 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 ZNF487B1APH4 448 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 D6RAR5 112 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 KCNK1O00180 336 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 MTA2O94776 668 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 TNFSF15O95150 251 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 CLDN7O95471 211 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms