RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 GOLGA8SH3BPF8 625 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 FOXN3O00409 490 aaPredicted RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 POLR1CO15160 346 aaPredicted RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 RASA4O43374 803 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 LDLRP01130 860 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 IVLP07476 585 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 PLEKP08567 350 aaPredicted RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 DLSTP36957 453 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 ADCY8P40145 1251 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 GNPDA1P46926 289 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 RGRP47804 291 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 CSNK1DP48730 415 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 ATP11AP98196 1134 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 SEMA5AQ13591 1074 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 ERV3-1Q14264 604 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 EIF2S3LQ2VIR3 472 aaKnown RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 C2CD6Q53TS8 623 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 CFAP58Q5T655 872 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 C1QL3Q5VWW1 255 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 TMEM135Q86UB9 458 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 ZNF354CQ86Y25 554 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 FAM71AQ8IYT1 594 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 EMC1Q8N766 993 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 RTL3Q8N8U3 475 aaKnown RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 OR10G6Q8NH81 332 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 NELFBQ8WX92 580 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 SCARF2Q96GP6 870 aaPredicted RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 AHCYL2Q96HN2 611 aaKnown RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 COQ10AQ96MF6 247 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 SUDS3Q9H7L9 328 aaPredicted RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 PDFQ9HBH1 243 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 MLXIPLQ9NP71 852 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 CASS4Q9NQ75 786 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 PHPT1Q9NRX4 125 aaPredicted RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 SIDT1Q9NXL6 827 aaKnown RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 DONSONQ9NYP3 566 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 AJAP1Q9UKB5 411 aaPredicted RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 CROTQ9UKG9 612 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 SLC17A4Q9Y2C5 497 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 ZDHHC9Q9Y397 364 aa7.78□□□□□ -1.16
NXF1-215ENST00000533440 OAS3Q9Y6K5 1087 aaKnown RBP7.78□□□□□ -1.16
NXF1-215ENST00000533440 BICDL2A1A5D9 508 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 GTPBP10A4D1E9 387 aaKnown RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 A8MU76 341 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 TCP11X1B4DZS4 312 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 TRAFD1O14545 582 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 PNMA6AP0CW24 399 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 PON1P27169 355 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 TEAD1P28347 426 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 ERCC5P28715 1186 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 SERPINA4P29622 427 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 ACTR1BP42025 376 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 BPIFB4P59827 614 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 ACTR1AP61163 376 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 POLR2LP62875 67 aaKnown RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 CDK3Q00526 305 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 MRPL49Q13405 166 aaKnown RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 ACOX1Q15067 660 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 CDO1Q16878 200 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 EXOC3L4Q17RC7 722 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 C15orf59Q2T9L4 293 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 PARP15Q460N3 678 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 CCDC14Q49A88 953 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 NADK2Q4G0N4 442 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 SNAP47Q5SQN1 464 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 PAPD7Q5XG87 772 aaKnown RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 ISM2Q6H9L7 571 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 KLHL10Q6JEL2 608 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 GBP6Q6ZN66 633 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 STRADAQ7RTN6 431 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 LYSMD3Q7Z3D4 306 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 SRLQ86TD4 932 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 ZNF761Q86XN6 746 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 UMODL1-AS1Q8N2C9 162 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 CBARPQ8N350 705 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 SFRP1Q8N474 314 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 CCDC185Q8N715 623 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 SLC37A2Q8TED4 501 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 CENPIQ92674 756 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 NTAN1Q96AB6 310 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 NUS1Q96E22 293 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 TCTN2Q96GX1 697 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 SLC38A3Q99624 504 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 TRIM55Q9BYV6 548 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 ZNF768Q9H5H4 540 aaKnown RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 ATP13A3Q9H7F0 1226 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 SIX2Q9NPC8 291 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 KCTD5Q9NXV2 234 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 UBA2Q9UBT2 640 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 ERRFI1Q9UJM3 462 aaPredicted RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 KCND3Q9UK17 655 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 MAN1B1Q9UKM7 699 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 PLEKHM1Q9Y4G2 1056 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 PCDHGA9Q9Y5G4 932 aaKnown RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 PCDHGA6Q9Y5G7 932 aa7.77□□□□□ -1.17
NXF1-215ENST00000533440 TNRC6AQ8NDV7 1962 aaKnown RBP7.77□□□□□ -1.17
NXF1-215ENST00000533440 CDC14CA4D256 554 aa7.76□□□□□ -1.17
NXF1-215ENST00000533440 GOLGA6L3A6NEY3 463 aa7.76□□□□□ -1.17
NXF1-215ENST00000533440 C2CD4BA6NLJ0 364 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms