RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 YWHAEP62258 255 aaKnown RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 PURAQ00577 322 aaKnown RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 FLI1Q01543 452 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 LRRC63Q05C16 580 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 CAPRIN1Q14444 709 aaKnown RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 RFTN1Q14699 578 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 PCOLCEQ15113 449 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 CCDC6Q16204 474 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 CCNG2Q16589 344 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 UGT8Q16880 541 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 EFHC1Q5JVL4 640 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 THEM4Q5T1C6 240 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 PPP1R2P3Q6NXS1 205 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 C3orf33Q6P1S2 294 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 FUT10Q6P4F1 479 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 PAPD4Q6PIY7 484 aaKnown RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 SPATA31D4Q6ZUB0 917 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 GPRIN3Q6ZVF9 776 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 ZNF410Q86VK4 478 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 LRRC6Q86X45 466 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 KRT73Q86Y46 540 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 CDKL3Q8IVW4 592 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 BBS7Q8IWZ6 715 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 CLEC4FQ8N1N0 589 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 KLHL36Q8N4N3 616 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 PIK3C3Q8NEB9 887 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 OR5T2Q8NGG2 359 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 OR52N1Q8NH53 320 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 CLHC1Q8NHS4 586 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 ZNF398Q8TD17 642 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 PRCCQ92733 491 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 NKD2Q969F2 451 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 RFKQ969G6 155 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 TLCD1Q96CP7 247 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 PGM2Q96G03 612 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 RADILQ96JH8 1075 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 PPM1MQ96MI6 270 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 CMTM3Q96MX0 182 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 LMF1Q96S06 567 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 ORAI2Q96SN7 254 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 NTPCRQ9BSD7 190 aaKnown RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 NTMT1Q9BV86 223 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 TMEM109Q9BVC6 243 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 ZNF717Q9BY31 904 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 SLC19A3Q9BZV2 496 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 ABCG8Q9H221 673 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 OR51V1Q9H2C8 321 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 ADAM7Q9H2U9 754 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 GOLPH3Q9H4A6 298 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 BARX1Q9HBU1 254 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 MLXIPLQ9NP71 852 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 MRPL40Q9NQ50 206 aaKnown RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 ZC4H2Q9NQZ6 224 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 MAN1C1Q9NR34 630 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 SLC38A7Q9NVC3 462 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 POLR3BQ9NW08 1133 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 TRNAU1APQ9NX07 287 aaKnown RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 COX16Q9P0S2 106 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 HMG20BQ9P0W2 317 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 RCOR3Q9P2K3 495 aaPredicted RBP5.53□□□□□ -1.52
CD44-236ENST00000533222 ACOT9Q9Y305 439 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 PRELID3BQ9Y3B1 194 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 LRRIQ1Q96JM4 1722 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 RUSC2Q8N2Y8 1516 aa5.53□□□□□ -1.52
CD44-236ENST00000533222 ATP10BO94823 1461 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ATP8B3O60423 1300 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TNKSO95271 1327 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 NOS1P29475 1434 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 C9orf118A6NHY6 69 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 H0YJX3 145 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 J3KRW8 73 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 AIM2O14862 343 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 MAGEB3O15480 346 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 DKC1O60832 514 aaKnown RBP eCLIP5.52□□□□□ -1.53
CD44-236ENST00000533222 CDC123O75794 336 aaPredicted RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 TNFAIP8O95379 198 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 VNN1O95497 513 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 DHFRP00374 187 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 AFPP02771 609 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 SERPINA5P05154 406 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TFAP2AP05549 437 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 CALB1P05937 261 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 URODP06132 367 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 WEE2P0C1S8 567 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TRAPPC2P0DI81 140 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TRAPPC2BP0DI82 140 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 OSMP13725 252 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ENO3P13929 434 aaPredicted RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 UQCRBP14927 111 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 IMPDH1P20839 514 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 PON1P27169 355 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 PTPN4P29074 926 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ACSL1P33121 698 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 SERPINB5P36952 375 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 MMP13P45452 471 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 OR3A3P47888 321 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 PCP4P48539 62 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TKTL1P51854 596 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 CDH4P55283 916 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 SPCS3P61009 180 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms