RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 YY2O15391 372 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 ZRANB2O95218 330 aaKnown RBP eCLIP16.64■□□□□ 0.25
PKP3-209ENST00000533069 TNFP01375 233 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 CAPNS1P04632 268 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 TGM2P21980 687 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 CD86P42081 329 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 INSM1Q01101 510 aaPredicted RBP16.64■□□□□ 0.25
PKP3-209ENST00000533069 DPTQ07507 201 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 ZBTB17Q13105 803 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 NR0B2Q15466 257 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 LRRC66Q68CR7 880 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 DENND2CQ68D51 928 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 NPNTQ6UXI9 565 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 TSPAN33Q86UF1 283 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 GKN2Q86XP6 184 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 RCOR2Q8IZ40 523 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 C17orf53Q8N3J3 647 aaPredicted RBP16.64■□□□□ 0.25
PKP3-209ENST00000533069 CNTD1Q8N815 330 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 LRRC57Q8N9N7 239 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 EXD1Q8NHP7 514 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 TSACCQ96A04 125 aaPredicted RBP16.64■□□□□ 0.25
PKP3-209ENST00000533069 C16orf45Q96MC5 204 aaPredicted RBP16.64■□□□□ 0.25
PKP3-209ENST00000533069 LYSMD1Q96S90 227 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 RBM15Q96T37 977 aaKnown RBP eCLIP16.64■□□□□ 0.255e-6■■□□□ 11.5
PKP3-209ENST00000533069 CLPBQ9H078 707 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 GOLPH3Q9H4A6 298 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 AMFRQ9UKV5 643 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 TFR2Q9UP52 801 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 CLCA2Q9UQC9 943 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 CHKBQ9Y259 395 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 IGF2RP11717 2491 aa16.64■□□□□ 0.25
PKP3-209ENST00000533069 CTAGE9A4FU28 777 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 EME2A4GXA9 379 aaPredicted RBP16.63■□□□□ 0.25
PKP3-209ENST00000533069 TMEM202A6NGA9 273 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 CST8O60676 142 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 PYGLP06737 847 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 MMP2P08253 660 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 SKOR1P84550 965 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 TARDBPQ13148 414 aaKnown RBP eCLIP16.63■□□□□ 0.25
PKP3-209ENST00000533069 TUBB2AQ13885 445 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 IHHQ14623 411 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 SLC14A2Q15849 920 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 CRTC1Q6UUV9 634 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 Q6ZVL8 140 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 ZNF765Q7L2R6 523 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 RD3Q7Z3Z2 195 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 PEX26Q7Z412 305 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 TECPR1Q7Z6L1 1165 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 HEATR4Q86WZ0 1026 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 PROSER1Q86XN7 944 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 DCBLD1Q8N8Z6 715 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 LPCAT1Q8NF37 534 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 KIF18AQ8NI77 898 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 IFI44Q8TCB0 444 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 OR1E3Q8WZA6 343 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 NAT6Q93015 286 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 NXPE2Q96DL1 559 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 PDXPQ96GD0 296 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 TUBB2BQ9BVA1 445 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 TEX101Q9BY14 249 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 ADGRE3Q9BY15 652 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 FGF22Q9HCT0 170 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 CAPN6Q9Y6Q1 641 aa16.63■□□□□ 0.25
PKP3-209ENST00000533069 hCG_1818297A0A087WSY0 165 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 A0A0U1RQJ8 604 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 CCDC66A2RUB6 948 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 GRID2IPA4D2P6 1211 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 TRABD2BA6NFA1 517 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 MTSS1O43312 755 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 OPA1O60313 960 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 PRLP01236 227 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 CASQ1P31415 396 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 STC1P52823 247 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 PRKD1Q15139 912 aaPredicted RBP16.62■□□□□ 0.25
PKP3-209ENST00000533069 PPP2R5EQ16537 467 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 CDKN3Q16667 212 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 RAET1GQ6H3X3 334 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 EFL1Q7Z2Z2 1120 aaKnown RBP16.62■□□□□ 0.25
PKP3-209ENST00000533069 NT5DC3Q86UY8 548 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 NLRP8Q86W28 1048 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 MARCH9Q86YJ5 346 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 CCDC50Q8IVM0 306 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 SLC35F3Q8IY50 421 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 NRSN1Q8IZ57 195 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 UBL4BQ8N7F7 174 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 ARL10Q8N8L6 244 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 TFB1MQ8WVM0 346 aaKnown RBP16.62■□□□□ 0.25
PKP3-209ENST00000533069 P3H4Q92791 437 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 IMP4Q96G21 291 aaKnown RBP16.62■□□□□ 0.25
PKP3-209ENST00000533069 NAPGQ99747 312 aaPredicted RBP16.62■□□□□ 0.25
PKP3-209ENST00000533069 LGR4Q9BXB1 951 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 ABCG4Q9H172 646 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 SLC25A51Q9H1U9 297 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 SEPT10Q9P0V9 454 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 FREM2Q5SZK8 3169 aa16.62■□□□□ 0.25
PKP3-209ENST00000533069 PRSS38A1L453 326 aa16.61■□□□□ 0.25
PKP3-209ENST00000533069 GOLGA6CA6NDK9 693 aa16.61■□□□□ 0.25
PKP3-209ENST00000533069 GOLGA6BA6NDN3 693 aa16.61■□□□□ 0.25
PKP3-209ENST00000533069 MT-CO3P00414 261 aa16.61■□□□□ 0.25
PKP3-209ENST00000533069 CELA2BP08218 269 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms