RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791		H3BNH8	94 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	LAG3	P18627	525 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	SSR2	P43308	183 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	MANF	P55145	182 aa	Known RBP	19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	ITGA7	Q13683	1181 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	PLA2G4E	Q3MJ16	856 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	IRF2BP2	Q7Z5L9	587 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	CMC1	Q7Z7K0	106 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	C12orf50	Q8NA57	414 aa	Predicted RBP	19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	KBTBD8	Q8NFY9	601 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	DHRS12	A0PJE2	317 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	FLT3LG	P49771	235 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	CDH13	P55290	713 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	LGALS3BP	Q08380	585 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	NR1D2	Q14995	579 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	PHYKPL	Q8IUZ5	450 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	ZNF354B	Q96LW1	612 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	GOLGA2P5	Q9HBQ8	144 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	SGK2	Q9HBY8	427 aa		19.55	■□□□□ 0.72
FGFR1-238	ENST00000532791	MAP2K7	O14733	419 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	PDK3	Q15120	406 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	MPPE1	Q53F39	396 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	KLHL12	Q53G59	568 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	ALYREF	Q86V81	257 aa	Known RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	SFRP1	Q8N474	314 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	POP5	Q969H6	163 aa	Known RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	B3GNT5	Q9BYG0	378 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	RHOJ	Q9H4E5	214 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	SLURP2	P0DP57	97 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	MYL9	P24844	172 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	ADSL	P30566	484 aa	Predicted RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	TAS2R41	P59536	307 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	CUZD1	Q86UP6	607 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	GPR20	Q99678	358 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	GLYATL1P3	A0A0U1RQE8	302 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	RPP40	O75818	363 aa	Known RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	LYPLA2	O95372	231 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	ANPEP	P15144	967 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	PARP15	Q460N3	678 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	MCMBP	Q9BTE3	642 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	MECR	Q9BV79	373 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	PLK2	Q9NYY3	685 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	TNFRSF21	O75509	655 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	ECM1	Q16610	540 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	CPA6	Q8N4T0	437 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	NARS2	Q96I59	477 aa	Known RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	TCF12	Q99081	682 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	GMIP	Q9P107	970 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	TRAF6	Q9Y4K3	522 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	KRT36	O76013	467 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	APOD	P05090	189 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	DBT	P11182	482 aa	Known RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	BMP6	P22004	513 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	LSM3	P62310	102 aa	Known RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	NAIF1	Q69YI7	327 aa	Predicted RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	ABHD15	Q6UXT9	468 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	CEP68	Q76N32	757 aa		19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	CXXC5	Q7LFL8	322 aa	Known RBP	19.54	■□□□□ 0.72
FGFR1-238	ENST00000532791	MYBL2	P10244	700 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	ITPKA	P23677	461 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	SRSF11	Q05519	484 aa	Known RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	GALNT18	Q6P9A2	607 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	VSTM1	Q6UX27	236 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	ZNF662	Q6ZS27	426 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	C12orf56	Q8IXR9	622 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	QKI	Q96PU8	341 aa	Known RBP eCLIP	19.53	■□□□□ 0.72	2e-10	■■□□□ 11.5
FGFR1-238	ENST00000532791	PHPT1	Q9NRX4	125 aa	Predicted RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	PNPO	Q9NVS9	261 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	SMIM28	A0A1B0GU29	152 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	ABHD14A-ACY1	A0A1B0GW23	586 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	UBE2QL1	A1L167	161 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	ADRA1B	P35368	520 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	ADAR	P55265	1226 aa	Known RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	SNAP47	Q5SQN1	464 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	FAM98A	Q8NCA5	519 aa	Known RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	TEFM	Q96QE5	360 aa	Known RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	KCND1	Q9NSA2	647 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	B4GALT4	O60513	344 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	SEC24A	O95486	1093 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	TOP3B	O95985	862 aa	Known RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	CORO1A	P31146	461 aa	Known RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	CPTP	Q5TA50	214 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	AMIGO2	Q86SJ2	522 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	AGAP11	Q8TF27	550 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	FAM84A	Q96KN4	292 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	SEMA3G	Q9NS98	782 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	PTDSS1	P48651	473 aa	Known RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	NOMO1	Q15155	1222 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	PTPN20	Q4JDL3	420 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	TIGD2	Q4W5G0	525 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	LCLAT1	Q6UWP7	414 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	KLRG1	Q96E93	195 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	COQ7	Q99807	217 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	ABCG4	Q9H172	646 aa		19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	INTS7	Q9NVH2	962 aa	Known RBP	19.53	■□□□□ 0.72
FGFR1-238	ENST00000532791	FGB	P02675	491 aa		19.52	■□□□□ 0.72
FGFR1-238	ENST00000532791	TEX44	Q53QW1	395 aa		19.52	■□□□□ 0.72
FGFR1-238	ENST00000532791	TRMO	Q9BU70	441 aa		19.52	■□□□□ 0.72
FGFR1-238	ENST00000532791	EXD2	Q9NVH0	621 aa		19.52	■□□□□ 0.72

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms