RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 VWA5B1Q5TIE3 1220 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 HMBOX1Q6NT76 420 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 P2RY8Q86VZ1 359 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM9CQ8IZT9 166 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 STX19Q8N4C7 294 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 PACRGLQ8N7B6 248 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM156AQ8NDB6 213 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CRYGNQ8WXF5 182 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 PSKH2Q96QS6 385 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 ACO2Q99798 780 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 LPIN3Q9BQK8 851 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 KCND2Q9NZV8 630 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 CCDC167Q9P0B6 97 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 KIF17Q9P2E2 1029 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 KCNN3Q9UGI6 736 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 TESMINQ9Y4I5 508 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 PCDHA2Q9Y5H9 948 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 NID2Q14112 1375 aa6.8□□□□□ -1.32
TGFBR3-209ENST00000532540 F5P12259 2224 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 NCOR1O75376 2440 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SDR42E2A6NKP2 422 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SOBPA7XYQ1 873 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 NBNO60934 754 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 IQCF3P0C7M6 154 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ATP6V1B2P21281 511 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 GRK3P35626 688 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 GRIK1P39086 918 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC26A3P40879 764 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 RPS9P46781 194 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 YAP1P46937 504 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ALDH3B2P48448 385 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 IDH3AP50213 366 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 POU5F1BQ06416 359 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 NIPAL4Q0D2K0 466 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC12A1Q13621 1099 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 GK3PQ14409 553 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 QPRTQ15274 297 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC39A5Q6ZMH5 540 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.79□□□□□ -1.325e-11■■■■■ 42.7
TGFBR3-209ENST00000532540 USP43Q70EL4 1123 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 THAP5Q7Z6K1 395 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 AMIGO1Q86WK6 493 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF677Q86XU0 584 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ZDHHC13Q8IUH4 622 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 RELL1Q8IUW5 271 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CDKL3Q8IVW4 592 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 MCOLN2Q8IZK6 566 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 PARP8Q8N3A8 854 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM109AQ8N4B1 249 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 KBTBD8Q8NFY9 601 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 EPS8L1Q8TE68 723 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 RNF145Q96MT1 663 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 MCEEQ96PE7 176 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 FERD3LQ96RJ6 166 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 DHRS9Q9BPW9 319 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ELOVL6Q9H5J4 265 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF395Q9H8N7 513 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TRIM45Q9H8W5 580 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC28A3Q9HAS3 691 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 FARSBQ9NSD9 589 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TRMT6Q9UJA5 497 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ANAPC2Q9UJX6 822 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 BAIAP2Q9UQB8 552 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 A0A0B4J269 797 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SMIM35A0A1B0GVV1 85 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 LOC110117498-PIK3R3F6TDL0 507 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 NDUFS2O75306 463 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 EPHA3P29320 983 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 HADHAP40939 763 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 JAM2P57087 298 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ABATP80404 500 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 RBP5P82980 135 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TAGLNQ01995 201 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 PUDPQ08623 228 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 PMS2P3Q13401 168 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 APOFQ13790 326 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TAB1Q15750 504 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 PDZK1Q5T2W1 519 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ANKRD26P1Q6NSI1 321 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 PRMT9Q6P2P2 845 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 RALGPS2Q86X27 583 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SMG8Q8ND04 991 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 NPAS2Q99743 824 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 KCTD10Q9H3F6 313 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SLA2Q9H6Q3 261 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 NGRNQ9NPE2 291 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 MKS1Q9NXB0 559 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 NCKIPSDQ9NZQ3 722 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CNOT11Q9UKZ1 510 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 PNMA8BQ9ULN7 279 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC27A5Q9Y2P5 690 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 BRWD1Q9NSI6 2320 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ECM29Q5VYK3 1845 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 LOC100506127A0A0U1RQW1 187 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM149AA5PLN7 773 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 F8W810 466 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms