RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CDH19Q9H159 772 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 ZFYVE1Q9HBF4 777 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 RAD18Q9NS91 495 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 WSB2Q9NYS7 404 aaPredicted RBP12.52□□□□□ -0.41
COPB1-208ENST00000532088 NFKBIL1Q9UBC1 381 aaPredicted RBP12.52□□□□□ -0.41
COPB1-208ENST00000532088 MTRF1LQ9UGC7 380 aaKnown RBP12.52□□□□□ -0.41
COPB1-208ENST00000532088 ZNF711Q9Y462 761 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 PCDHGA11Q9Y5H2 935 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 SDR42E2A6NKP2 422 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 C2orf81A6NN90 581 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 NEMP1O14524 444 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 SEMA4FO95754 770 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 ALPIP09923 528 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 CTPS1P17812 591 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 LHCGRP22888 699 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 ADRA1DP25100 572 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 CCR5P51681 352 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 STC1P52823 247 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 PLTPP55058 493 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 RPS21P63220 83 aaKnown RBP12.51□□□□□ -0.41
COPB1-208ENST00000532088 FAM193AP78312 1265 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
COPB1-208ENST00000532088 OLIG2Q13516 323 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 PCID2Q5JVF3 399 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 SYCP2LQ5T4T6 812 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 WDR93Q6P2C0 686 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 LIPIQ6XZB0 460 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 GLT6D1Q7Z4J2 308 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 NLRP8Q86W28 1048 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 CACUL1Q86Y37 369 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 RELL1Q8IUW5 271 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 NRSN1Q8IZ57 195 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 TTC30BQ8N4P2 665 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 GPR161Q8N6U8 529 aaKnown RBP12.51□□□□□ -0.41
COPB1-208ENST00000532088 OR14C36Q8NHC7 312 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 FBXO25Q8TCJ0 367 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 ERLEC1Q96DZ1 483 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 TOE1Q96GM8 510 aaKnown RBP12.51□□□□□ -0.41
COPB1-208ENST00000532088 NAT9Q9BTE0 207 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 TPSD1Q9BZJ3 242 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 ANKZF1Q9H8Y5 726 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■■■■□ 24.4
COPB1-208ENST00000532088 CYP8B1Q9UNU6 501 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 TRIOO75962 3097 aa12.51□□□□□ -0.41
COPB1-208ENST00000532088 C1orf232A0A0U1RR37 186 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 ESYT3A0FGR9 886 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 FAM86C2PA6NEL3 165 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 MROH6A6NGR9 719 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 PLK4O00444 970 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 LDB2O43679 373 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 ELFN1P0C7U0 828 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 LPOP22079 712 aaPredicted RBP12.5□□□□□ -0.41
COPB1-208ENST00000532088 ECHS1P30084 290 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 HADHAP40939 763 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 DCDC1P59894 354 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 PTSQ03393 145 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 CNGA3Q16281 694 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 KCTD19Q17RG1 926 aaPredicted RBP12.5□□□□□ -0.41
COPB1-208ENST00000532088 LRRC66Q68CR7 880 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 MRPL14Q6P1L8 145 aaKnown RBP12.5□□□□□ -0.41
COPB1-208ENST00000532088 CENPUQ71F23 418 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 ZNF765Q7L2R6 523 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 HORMAD1Q86X24 394 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 ZBTB44Q8NCP5 570 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 PPHLN1Q8NEY8 458 aaKnown RBP12.5□□□□□ -0.41
COPB1-208ENST00000532088 BLOC1S5Q8TDH9 187 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 STYXQ8WUJ0 223 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 SIGLEC10Q96LC7 697 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 COQ10AQ96MF6 247 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 LENG8Q96PV6 779 aaPredicted RBP12.5□□□□□ -0.41
COPB1-208ENST00000532088 KIFC1Q9BW19 673 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 C1QTNF7Q9BXJ2 289 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 GPR63Q9BZJ6 419 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 ZSCAN32Q9NX65 697 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 PKD2L2Q9NZM6 624 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 IL17CQ9P0M4 197 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 SOX13Q9UN79 622 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 TCAF1Q9Y4C2 921 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 PCDHGA2Q9Y5H1 932 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 SPO11Q9Y5K1 396 aa12.5□□□□□ -0.41
COPB1-208ENST00000532088 FAM237BA0A1B0GVD1 139 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 GOLGA8MH3BSY2 632 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 H7C0S8 307 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 LATO43561 262 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 RNGTTO60942 597 aaKnown RBP12.49□□□□□ -0.41
COPB1-208ENST00000532088 TM7SF2O76062 418 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 TTC4O95801 387 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 PRKCGP05129 697 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 SP9P0CG40 484 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 C6P13671 934 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 MGAT1P26572 445 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 ACSL1P33121 698 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 SPINT3P49223 89 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 FNTBP49356 437 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 CARSP49589 748 aaKnown RBP12.49□□□□□ -0.41
COPB1-208ENST00000532088 LIG3P49916 1009 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 ZNF140P52738 457 aaPredicted RBP12.49□□□□□ -0.41
COPB1-208ENST00000532088 TERF1P54274 439 aa12.49□□□□□ -0.41
COPB1-208ENST00000532088 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms