RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 HLA-DQB2P05538 268 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 PDHA1P08559 390 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 GLB1P16278 677 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 CD86P42081 329 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 ABCG1P45844 678 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 GABREP78334 506 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 CDK3Q00526 305 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 ISXQ2M1V0 245 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 TFDP3Q5H9I0 405 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 CDCP2Q5VXM1 449 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 CRTC1Q6UUV9 634 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 DAAM2Q86T65 1068 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 PLD5Q8N7P1 536 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 TC2NQ8N9U0 490 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 EXD1Q8NHP7 514 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 TFB1MQ8WVM0 346 aaKnown RBP12.55□□□□□ -0.4
C11orf54-210ENST00000531516 P3H4Q92791 437 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 PDXPQ96GD0 296 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 ZNF578Q96N58 590 aaPredicted RBP12.55□□□□□ -0.4
C11orf54-210ENST00000531516 PANX2Q96RD6 677 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 GFM1Q96RP9 751 aaKnown RBP12.55□□□□□ -0.4
C11orf54-210ENST00000531516 LGMNQ99538 433 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 CDH19Q9H159 772 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 SUDS3Q9H7L9 328 aaPredicted RBP12.55□□□□□ -0.4
C11orf54-210ENST00000531516 FGF22Q9HCT0 170 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 THSD1Q9NS62 852 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 TRNAU1APQ9NX07 287 aaKnown RBP12.55□□□□□ -0.4
C11orf54-210ENST00000531516 AKAP7Q9P0M2 348 aaPredicted RBP12.55□□□□□ -0.4
C11orf54-210ENST00000531516 ALG6Q9Y672 507 aa12.55□□□□□ -0.4
C11orf54-210ENST00000531516 LY6G6EA0A0G2JKS1 128 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 B4DGG1 531 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 TAF4O00268 1085 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 FZD6O60353 706 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 BRINP1O60477 761 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 ASMTLO95671 621 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 CAPNS1P04632 268 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 PTMAP06454 111 aaKnown RBP12.54□□□□□ -0.4
C11orf54-210ENST00000531516 TGM2P21980 687 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 LHCGRP22888 699 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 CTNNA2P26232 953 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 GNPDA1P46926 289 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 LSSP48449 732 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 EIF3IQ13347 325 aaKnown RBP12.54□□□□□ -0.4
C11orf54-210ENST00000531516 KAZNQ674X7 775 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 TSPAN33Q86UF1 283 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 CPNE8Q86YQ8 564 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 ARL14Q8N4G2 192 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 KYQ8NBH2 561 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 ARRDC2Q8TBH0 407 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 CCDC97Q96F63 343 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-210ENST00000531516 HIC2Q96JB3 615 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 TMEM74Q96NL1 305 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 AGAP3Q96P47 875 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 TMEM168Q9H0V1 697 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 SLC25A51Q9H1U9 297 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 POLR1BQ9H9Y6 1135 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 CD84Q9UIB8 345 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 GPSM3Q9Y4H4 160 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 U3KQA8 63 aa12.54□□□□□ -0.4
C11orf54-210ENST00000531516 IGF2RP11717 2491 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 A0A087WV48 116 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 RHPN2P1A8MT19 583 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 ANKRD66B4E2M5 251 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 CST8O60676 142 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 ZNF189O75820 626 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 STK10O94804 968 aaKnown RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 LCA5LO95447 670 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 IVLP07476 585 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 CELA2BP08218 269 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 PNLIPP16233 465 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 MLLT3P42568 568 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 PPM1FP49593 454 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 ZNF75DP51815 510 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 STC1P52823 247 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 PCBP4P57723 403 aaKnown RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 ERVPABLB-1P60509 514 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 PTSQ03393 145 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 SLC10A2Q12908 348 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 LRP8Q14114 963 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 SLC14A2Q15849 920 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 TBC1D25Q3MII6 688 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 C14orf28Q4W4Y0 310 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 BROXQ5VW32 411 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 C11orf63Q6NUN7 778 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 DOK6Q6PKX4 331 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 C19orf48Q6RUI8 117 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 MFSD7Q6UXD7 560 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 ADAMTSL4Q6UY14 1074 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 TECPR1Q7Z6L1 1165 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 GALNT13Q8IUC8 556 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 CBARPQ8N350 705 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 ZNF248Q8NDW4 579 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 WDR36Q8NI36 951 aaKnown RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
C11orf54-210ENST00000531516 CCDC74AQ96AQ1 378 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 LRRC45Q96CN5 670 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 NSMCE3Q96MG7 304 aa12.53□□□□□ -0.4
C11orf54-210ENST00000531516 LYSMD1Q96S90 227 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms