RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SLC29A2Q14542 456 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TMEM52BQ4KMG9 183 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3GQ6DHY5 549 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3CQ6IPX1 549 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 KBTBD6Q86V97 674 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3Q8IZP1 549 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-205ENST00000531303 GSDMBQ8TAX9 411 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 FBF1Q8TES7 1133 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 RLN3Q8WXF3 142 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 EPB41L4BQ9H329 900 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 C20orf96Q9NUD7 363 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-205ENST00000531303 FZD4Q9ULV1 537 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 FAM169AQ9Y6X4 670 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 CCDC162PA2VCL2 907 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 OR51F1A6NGY5 319 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 TSPAN6O43657 245 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 PLRG1O43660 514 aaKnown RBP19.02■□□□□ 0.63
SMPD1-205ENST00000531303 LZTS3O60299 673 aaPredicted RBP19.02■□□□□ 0.63
SMPD1-205ENST00000531303 RPP40O75818 363 aaKnown RBP19.02■□□□□ 0.63
SMPD1-205ENST00000531303 C6P13671 934 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 BPIP17213 487 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 PAMP19021 973 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 PHBP35232 272 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 ETV3P41162 512 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 MAGEA9P43362 315 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 CLCN5P51795 746 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 LONRF1Q17RB8 773 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 Q6ZVL8 140 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 KLK6Q92876 244 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 CDKN2AIPNLQ96HQ2 116 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 IER2Q9BTL4 223 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 INVSQ9Y283 1065 aa19.02■□□□□ 0.63
SMPD1-205ENST00000531303 TCRBV9S1A1TA0A576 114 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 IGLON5A6NGN9 336 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 SLC7A4O43246 635 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 AP1G1O43747 822 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 GSTA2P09210 222 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 C7P10643 843 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 ACSL1P33121 698 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 SPINT3P49223 89 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 SEL1L3Q68CR1 1132 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 TSSK4Q6SA08 328 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 FAM151BQ6UXP7 276 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 PTAR1Q7Z6K3 402 aaPredicted RBP19.01■□□□□ 0.63
SMPD1-205ENST00000531303 MREGQ8N565 214 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 OTUD6BQ8N6M0 293 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 FRMD1Q8N878 549 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 GPR26Q8NDV2 337 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 MRRFQ96E11 262 aaKnown RBP19.01■□□□□ 0.63
SMPD1-205ENST00000531303 BTBD1Q9H0C5 482 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 EPHX3Q9H6B9 360 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 PKD2L2Q9NZM6 624 aa19.01■□□□□ 0.63
SMPD1-205ENST00000531303 USP36Q9P275 1121 aaKnown RBP19.01■□□□□ 0.63
SMPD1-205ENST00000531303 A0A0C4DFX4 3053 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 A0A1W2PQU0 124 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 H0Y858 1186 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 K7ESF4 209 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 RNGTTO60942 597 aaKnown RBP19■□□□□ 0.63
SMPD1-205ENST00000531303 SPAG6O75602 509 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 GOT2P00505 430 aaKnown RBP19■□□□□ 0.63
SMPD1-205ENST00000531303 TSHRP16473 764 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 ARNTP27540 789 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 HADHAP40939 763 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 THOC5Q13769 683 aaKnown RBP19■□□□□ 0.63
SMPD1-205ENST00000531303 HSP90AA5PQ58FG0 334 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 ARMC3Q5W041 872 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 KIAA0930Q6ICG6 404 aaPredicted RBP19■□□□□ 0.63
SMPD1-205ENST00000531303 RASSF3Q86WH2 238 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 CAMKK1Q8N5S9 505 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 FAM160A2Q8N612 972 aaPredicted RBP19■□□□□ 0.63
SMPD1-205ENST00000531303 TMEM105Q8N8V8 129 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 ANKRD7Q92527 254 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 FAM131CQ96AQ9 280 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 CERS2Q96G23 380 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 FAM96AQ9H5X1 160 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 IARS2Q9NSE4 1012 aaKnown RBP19■□□□□ 0.63
SMPD1-205ENST00000531303 SLC17A6Q9P2U8 582 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 RIMKLBQ9ULI2 386 aa19■□□□□ 0.63
SMPD1-205ENST00000531303 A0A087WUV0 522 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-205ENST00000531303 DYNC1I1O14576 645 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 WNT9AO14904 365 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 RECQL5O94762 991 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-205ENST00000531303 F7P08709 466 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-205ENST00000531303 MAT2AP31153 395 aaKnown RBP18.99■□□□□ 0.63
SMPD1-205ENST00000531303 MC4RP32245 332 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 STX2P32856 288 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 SPAM1P38567 509 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 ARCN1P48444 511 aaKnown RBP18.99■□□□□ 0.63
SMPD1-205ENST00000531303 ACVR1Q04771 509 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 DMWDQ09019 674 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 EFTUD2Q15029 972 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMPD1-205ENST00000531303 KCNMB4Q86W47 210 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 OR2W6PQ8NHA6 318 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 PEX13Q92968 403 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 SCAMP4Q969E2 229 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 TOE1Q96GM8 510 aaKnown RBP18.99■□□□□ 0.63
SMPD1-205ENST00000531303 COQ10AQ96MF6 247 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 IL26Q9NPH9 171 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 MOCS1Q9NZB8 636 aa18.99■□□□□ 0.63
SMPD1-205ENST00000531303 RABGEF1Q9UJ41 708 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms