RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 MATR3P43243 847 aaKnown RBP eCLIP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 CXCR3P49682 368 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 GPR143P51810 404 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 CDH13P55290 713 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 STARD6P59095 220 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 MRPS35P82673 323 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 MRPS34P82930 218 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 RBPJQ06330 500 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 GRSF1Q12849 480 aaKnown RBP eCLIP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 KPNB1Q14974 876 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 HSPB2Q16082 182 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 PFKFB3Q16875 520 aaPredicted RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 SFMBT2Q5VUG0 894 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 FBXO46Q6PJ61 603 aaPredicted RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 PPP1R21Q6ZMI0 780 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 HOOK3Q86VS8 718 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 LURAP1LQ8IV03 231 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 MFN1Q8IWA4 741 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 WDR63Q8IWG1 891 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 UEVLDQ8IX04 471 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 MAML2Q8IZL2 1156 aaPredicted RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 ZNF276Q8N554 614 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 OR8K5Q8NH50 307 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 HUS1BQ8NHY5 278 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 GRAPLQ8TC17 118 aaPredicted RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 ASB10Q8WXI3 467 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 SNAPC3Q92966 411 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 RRNAD1Q96FB5 475 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 ZC3HAV1LQ96H79 300 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 SLC41A2Q96JW4 573 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 CCDC17Q96LX7 622 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 Q96MF0 132 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 CAMK1GQ96NX5 476 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 NEK1Q96PY6 1258 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 INTS14Q96SY0 518 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 PARK7Q99497 189 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 MACROD1Q9BQ69 325 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 ABHD6Q9BV23 337 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 SSBP3Q9BWW4 388 aaPredicted RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 PPIL3Q9H2H8 161 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 SLCO5A1Q9H2Y9 848 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 KCNK15Q9H427 330 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 NOL11Q9H8H0 719 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 ANKZF1Q9H8Y5 726 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 CNOT10Q9H9A5 744 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 CYP4F11Q9HBI6 524 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 ZNF304Q9HCX3 659 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 WDR6Q9NNW5 1121 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 ARL8BQ9NVJ2 186 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 AURKAIP1Q9NWT8 199 aaPredicted RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 HPF1Q9NWY4 346 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 ARMCX3Q9UH62 379 aaPredicted RBP3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 HACL1Q9UJ83 578 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 COG5Q9UP83 839 aa3.59□□□□□ -1.83
AMBRA1-208ENST00000529558 A0A0U1RQF3 1178 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PIPSLA2A3N6 862 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 OOEPA6NGQ2 149 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 DDTLA6NHG4 134 aaPredicted RBP3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 CGB1A6NKQ9 187 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 BTBD19C9JJ37 291 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 NPIPB6E9PJ23 425 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 H3BQ06 376 aaPredicted RBP3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 RRHO14718 337 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PGRMC2O15173 223 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 RNMTO43148 476 aaKnown RBP3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PRPSAP2O60256 369 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 TLR2O60603 784 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 RSL1D1O76021 490 aaKnown RBP3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 ZWINTO95229 277 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 TSPAN15O95858 294 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 HMOX1P09601 288 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 OR52Z1P0C646 297 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 ELFN1P0C7U0 828 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 EBLN1P0CF75 366 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 ETFAP13804 333 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PFKFB1P16118 471 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 ACRV1P26436 265 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 HSPA4P34932 840 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PRCPP42785 496 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 CLCN5P51795 746 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 CLCNKBP51801 687 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 NAGLUP54802 743 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 STX1BP61266 288 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 SIRPAP78324 504 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 ADORA2A-AS1P86434 159 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 SORDQ00796 357 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 NAE1Q13564 534 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PKP1Q13835 747 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 GALNT3Q14435 633 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PTPRCAPQ14761 206 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 ATP13A5Q4VNC0 1218 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 SLC39A12Q504Y0 691 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 KIAA1755Q5JYT7 1200 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 ABHD17BQ5VST6 288 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PLA2G4FQ68DD2 849 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 HIST2H2BCQ6DN03 193 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 HIST2H2BDQ6DRA6 164 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 PLEKHA7Q6IQ23 1121 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 ABRAXAS1Q6UWZ7 409 aa3.58□□□□□ -1.84
AMBRA1-208ENST00000529558 NAPRTQ6XQN6 538 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms