RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 SLC17A4Q9Y2C5 497 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 ST14Q9Y5Y6 855 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 ITPR3Q14573 2671 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 TRIM49BA6NDI0 452 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 DPM1O60762 260 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 ZNF202O95125 648 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 GNA14O95837 355 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 MT-ND3P03897 115 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 GM2AP17900 193 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 USP8P40818 1118 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 EPHA4P54764 986 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 RALGDSQ12967 914 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 ZC3H18Q86VM9 953 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 TRIM59Q8IWR1 403 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 TP53INP2Q8IXH6 220 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 ECHDC3Q96DC8 303 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 TBC1D31Q96DN5 1066 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 STAMBPL1Q96FJ0 436 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 DHTKD1Q96HY7 919 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 COQ10AQ96MF6 247 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 GPR87Q9BY21 358 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 TRIM55Q9BYV6 548 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 ATP13A3Q9H7F0 1226 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 SIDT1Q9NXL6 827 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 PRRC2CQ9Y520 2896 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 CHD5Q8TDI0 1954 aa11.59□□□□□ -0.55
AMBRA1-207ENST00000529553 APCP25054 2843 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 HEATR9A2RTY3 570 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 K7ELQ4 463 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 PSMA7O14818 248 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 TOX3O15405 576 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 CEACAM4O75871 244 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 DNAJB5O75953 348 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 PRF1P14222 555 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 NFKBIAP25963 317 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 SERPINA4P29622 427 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 FLT3P36888 993 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 PPP1R2P41236 205 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 GARSP41250 739 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 ACTR1BP42025 376 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 PPM1FP49593 454 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 ACTR1AP61163 376 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 STIM1Q13586 685 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 LRP8Q14114 963 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 ACOX1Q15067 660 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 CHRNA6Q15825 494 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 UGT8Q16880 541 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 PARP15Q460N3 678 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 FAM102AQ5T9C2 384 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 ZSWIM9Q86XI8 627 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 ZNF354CQ86Y25 554 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 CAMK1DQ8IU85 385 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 PLXDC1Q8IUK5 500 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 PELI3Q8N2H9 469 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 Q8NA96 180 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 GALNT6Q8NCL4 622 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 TMEM35BQ8NCS4 154 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 SHC3Q92529 594 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 PNPLA2Q96AD5 504 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 SPATA32Q96LK8 384 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 CFAP57Q96MR6 1250 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 STN1Q9H668 368 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 NOL6Q9H6R4 1146 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 SARS2Q9NP81 518 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 ACSS2Q9NR19 701 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 TMEM59LQ9UK28 342 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 NEU3Q9UQ49 428 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 HIVEP3Q5T1R4 2406 aa11.58□□□□□ -0.56
AMBRA1-207ENST00000529553 SHANK1Q9Y566 2161 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 ARHGEF17Q96PE2 2063 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 A6NCN8 305 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 FAM72CH0Y354 149 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 LRIG2O94898 1065 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 PLEKP08567 350 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 ZNF28P17035 718 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 CASP14P31944 242 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 CDH5P33151 784 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 CCL11P51671 97 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 DNASE1L3Q13609 305 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 FAM72AQ5TYM5 149 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 FAM72DQ6L9T8 149 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 SRLQ86TD4 932 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 FAM72BQ86X60 149 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 XYLT1Q86Y38 959 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 RHOT1Q8IXI2 618 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 CBARPQ8N350 705 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 SLC37A2Q8TED4 501 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 PDCD6IPQ8WUM4 868 aaKnown RBP11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 SPOCK2Q92563 424 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 KLC2Q9H0B6 622 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 ING2Q9H160 280 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 SUDS3Q9H7L9 328 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 RCOR3Q9P2K3 495 aaPredicted RBP11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 DOCK4Q8N1I0 1966 aa11.57□□□□□ -0.56
AMBRA1-207ENST00000529553 F8P00451 2351 aa11.56□□□□□ -0.56
AMBRA1-207ENST00000529553 WASH4PA8MWX3 477 aa11.56□□□□□ -0.56
AMBRA1-207ENST00000529553 KIAA0754O94854 1291 aa11.56□□□□□ -0.56
AMBRA1-207ENST00000529553 NDUFA10O95299 355 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms