RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 BPIFA1Q9NP55 256 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 WSB2Q9NYS7 404 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SAMD15Q9P1V8 674 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ZFR2Q9UPR6 939 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 COQ6Q9Y2Z9 468 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TBC1D3DA0A087WVF3 549 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3IA0A087WXS9 549 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3EA0A087X179 549 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3KA0A087X1G2 549 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FAM237BA0A1B0GVD1 139 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 A0A1W2PQU0 124 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 MAGEB16A2A368 324 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3FA6NER0 549 aaPredicted RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 IGLON5A6NGN9 336 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 C10orf142B7Z368 130 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3LB9A6J9 549 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CCL22O00626 93 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RNGTTO60942 597 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3HP0C7X1 549 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 C6P13671 934 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PSMA3P25788 255 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CD6P30203 668 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 OXTRP30559 389 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PPP2CBP62714 309 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PPP2CAP67775 309 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TMPRSS15P98073 1019 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3GQ6DHY5 549 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3CQ6IPX1 549 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ESRP1Q6NXG1 681 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 Q6ZVL8 140 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TMEM135Q86UB9 458 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RELL1Q8IUW5 271 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBC1D3Q8IZP1 549 aaPredicted RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 OR13J1Q8NGT2 312 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 OR2T34Q8NGX1 318 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CXorf40AQ8TE69 158 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 AENQ8WTP8 325 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PYROXD1Q8WU10 500 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PTCD2Q8WV60 388 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NELL1Q92832 810 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FAM122AQ96E09 287 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 COQ10AQ96MF6 247 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TXLNGYQ9BZA5 131 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TSPYL1Q9H0U9 437 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 MRM3Q9HC36 420 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PREBQ9HCU5 417 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TREX1Q9NSU2 369 aa12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ZC3H7BQ9UGR2 993 aaKnown RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 MBD1Q9UIS9 605 aaPredicted RBP12.14□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CCDC163A0A0D9SF12 145 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PSMD11O00231 422 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SEMA4FO95754 770 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 BPIP17213 487 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PGAM1P18669 254 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PLA2G5P39877 138 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ETV3P41162 512 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SPINT3P49223 89 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ARSDP51689 593 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CBX1P83916 185 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ACVR1Q04771 509 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FGL2Q14314 439 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ACOX1Q15067 660 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ANKRD20A4Q4UJ75 823 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TMEM259Q4ZIN3 620 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ARMC3Q5W041 872 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NEK5Q6P3R8 708 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 UNC5AQ6ZN44 842 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NLRP9Q7RTR0 991 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TECPR1Q7Z6L1 1165 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 GPR26Q8NDV2 337 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 STYXQ8WUJ0 223 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ZNF669Q96BR6 464 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CFAP36Q96G28 342 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NAT9Q9BTE0 207 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 GPR174Q9BXC1 333 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 KCNH6Q9H252 994 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 C6orf106Q9H6K1 298 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NLE1Q9NVX2 485 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FBXO4Q9UKT5 387 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RIMKLBQ9ULI2 386 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RPS6KL1Q9Y6S9 549 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 LRRK1Q38SD2 2015 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SCN8AQ9UQD0 1980 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ZCWPW2A0A1B0GU75 182 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 LRRC72A6NJI9 287 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 LZTS3O60299 673 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RECQL5O94762 991 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 MAT2AP31153 395 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 GPX6P59796 221 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RPS21P63220 83 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PDE1BQ01064 536 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NHLH1Q02575 133 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CREB5Q02930 508 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 GPS2Q13227 327 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CASP8Q14790 479 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms