RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 RECQLP46063 649 aaPredicted RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 ZNF846Q147U1 533 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 NR6A1Q15406 480 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 SPPL2CQ8IUH8 684 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 GPC2Q8N158 579 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 TM6SF2Q9BZW4 377 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 LHX5Q9H2C1 402 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 ZDHHC2Q9UIJ5 367 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 HSPA1AP0DMV8 641 aaKnown RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 HSPA1BP0DMV9 641 aaKnown RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 CD52P31358 61 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 PIK3CGP48736 1102 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 ESRP1Q6NXG1 681 aaKnown RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 Q8N9G6 341 aaPredicted RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 RNF145Q96MT1 663 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 ZBTB26Q9HCK0 441 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 VTA1Q9NP79 307 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 TMEM114B3SHH9 223 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 TSPAN1O60635 241 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 GLP2RO95838 553 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 GSRP00390 522 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 MAGP20916 626 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 TRPC1P48995 793 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 PSEN2P49810 448 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 TIGD2Q4W5G0 525 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 SAMD4BQ5PRF9 694 aaKnown RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 CACUL1Q86Y37 369 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 ACDQ96AP0 544 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 FCRL2Q96LA5 508 aaPredicted RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 GLT1D1Q96MS3 346 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 ZBED2Q9BTP6 218 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 C9orf16Q9BUW7 83 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 CINPQ9BW66 212 aaPredicted RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 NIFKQ9BYG3 293 aaKnown RBP17.9■□□□□ 0.46
LTBP3-210ENST00000528516 OAZ3Q9UMX2 235 aa17.9■□□□□ 0.46
LTBP3-210ENST00000528516 CAPN15O75808 1086 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 INSCQ1MX18 579 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 FSTL4Q6MZW2 842 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 PLPPR4Q7Z2D5 763 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 CNTD1Q8N815 330 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 SCAMP5Q8TAC9 235 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 UNC93B1Q9H1C4 597 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 NMRK2Q9NPI5 230 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 TRMT6Q9UJA5 497 aaKnown RBP17.89■□□□□ 0.45
LTBP3-210ENST00000528516 ST3GAL5Q9UNP4 418 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 EI24O14681 340 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 ACOT8O14734 319 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 RAMP2O60895 175 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 NMBRP28336 390 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 C14orf80Q86SX3 495 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 CIR1Q86X95 450 aaPredicted RBP17.89■□□□□ 0.45
LTBP3-210ENST00000528516 ATAD1Q8NBU5 361 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 GBA3Q9H227 469 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 GBA2Q9HCG7 927 aaPredicted RBP17.89■□□□□ 0.45
LTBP3-210ENST00000528516 BTN3A1O00481 513 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 ALDH2P05091 517 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 SERPIND1P05546 499 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 OPRL1P41146 370 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 LHX1P48742 406 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 NRG1Q02297 640 aaPredicted RBP17.89■□□□□ 0.45
LTBP3-210ENST00000528516 GALNT3Q14435 633 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 C15orf39Q6ZRI6 1047 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 DEFB128Q7Z7B8 93 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 TFAP2CQ92754 450 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 SMAD5Q99717 465 aaKnown RBP17.89■□□□□ 0.45
LTBP3-210ENST00000528516 TBL1YQ9BQ87 522 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 KATNAL1Q9BW62 490 aa17.89■□□□□ 0.45
LTBP3-210ENST00000528516 DHRS12A0PJE2 317 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.88■□□□□ 0.45
LTBP3-210ENST00000528516 FFAR3O14843 346 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 GPR42O15529 346 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 SOAT2O75908 522 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 FSCN1Q16658 493 aaKnown RBP17.88■□□□□ 0.45
LTBP3-210ENST00000528516 CYP51A1Q16850 503 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 PAGE2BQ5JRK9 111 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 SPANXN3Q5MJ09 141 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 STXBP5Q5T5C0 1151 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 PIWIL3Q7Z3Z3 882 aaKnown RBP17.88■□□□□ 0.45
LTBP3-210ENST00000528516 MYLPFQ96A32 169 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 DACH2Q96NX9 599 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 KIF17Q9P2E2 1029 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 TBX4P57082 545 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 MRPS15P82914 257 aaKnown RBP17.88■□□□□ 0.45
LTBP3-210ENST00000528516 CARNMT1Q8N4J0 409 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 FNDC5Q8NAU1 212 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 RBPJLQ9UBG7 517 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 PTBP2Q9UKA9 531 aaKnown RBP17.88■□□□□ 0.45
LTBP3-210ENST00000528516 PRORSD1PA6NEY8 169 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 LRIG2O94898 1065 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 C1QAP02745 245 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 JUNP05412 331 aaKnown RBP17.88■□□□□ 0.45
LTBP3-210ENST00000528516 CDC42EP1Q00587 391 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 ARHGEF7Q14155 803 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 CADM3Q8N126 398 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 PQLC3Q8N755 202 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 GLMNQ92990 594 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 SMARCD1Q96GM5 515 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 ROGDIQ9GZN7 287 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 PLAC1Q9HBJ0 212 aa17.88■□□□□ 0.45
LTBP3-210ENST00000528516 IFT80Q9P2H3 777 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms