RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 JPH3Q8WXH2 748 aaPredicted RBP23.55■■□□□ 1.36
CPSF1-202ENST00000527827 PMEPA1Q969W9 287 aa23.55■■□□□ 1.36
CPSF1-202ENST00000527827 DTD2Q96FN9 168 aa23.55■■□□□ 1.36
CPSF1-202ENST00000527827 CCDC74BQ96LY2 380 aa23.55■■□□□ 1.36
CPSF1-202ENST00000527827 ZNF599Q96NL3 588 aa23.55■■□□□ 1.36
CPSF1-202ENST00000527827 TMEM191CA6NGB0 347 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 SOCS5O75159 536 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 TNFAIP3P21580 790 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 LHCGRP22888 699 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 ETV3P41162 512 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 CDK3Q00526 305 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 DENND2CQ68D51 928 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 SLC30A9Q6PML9 568 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 RBM43Q6ZSC3 357 aaKnown RBP23.54■■□□□ 1.36
CPSF1-202ENST00000527827 HSD11B1LQ7Z5J1 315 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 NAGSQ8N159 534 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 PGBD5Q8N414 524 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 ANKRD20A12PQ8NF67 263 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 PDCD6IPQ8WUM4 868 aaKnown RBP23.54■■□□□ 1.36
CPSF1-202ENST00000527827 SLC12A9Q9BXP2 914 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 KCTD5Q9NXV2 234 aa23.54■■□□□ 1.36
CPSF1-202ENST00000527827 ZFC3H1O60293 1989 aaKnown RBP23.53■■□□□ 1.36
CPSF1-202ENST00000527827 A0A1W2PQ67 120 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 STMND1H3BQB6 276 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 PPM1DO15297 605 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 PRPSAP2O60256 369 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 RNF8O76064 485 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 CPP00450 1065 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 CCDC172P0C7W6 258 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 POLD2P49005 469 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 CTBSQ01459 385 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 PTPRRQ15256 657 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 PSTKQ8IV42 348 aaKnown RBP23.53■■□□□ 1.36
CPSF1-202ENST00000527827 NKD1Q969G9 470 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 TAAR9Q96RI9 348 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 NUDCD1Q96RS6 583 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 SLC17A4Q9Y2C5 497 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 PCDHGA3Q9Y5H0 932 aa23.53■■□□□ 1.36
CPSF1-202ENST00000527827 LRCH4O75427 683 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 TEAD1P28347 426 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 ADCY8P40145 1251 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 GPR3P46089 330 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 LIMK2P53671 638 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 MYL5Q02045 173 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 TRAF2Q12933 501 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 ZNF235Q14590 738 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 NKAIN2Q5VXU1 208 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 PPP1R2P3Q6NXS1 205 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 Q6ZVL8 140 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 LZTR1Q8N653 840 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 FNIP1Q8TF40 1166 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 HSD3B7Q9H2F3 369 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 NOD2Q9HC29 1040 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 LMBRD1Q9NUN5 540 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 GEMIN8Q9NWZ8 242 aaKnown RBP23.52■■□□□ 1.36
CPSF1-202ENST00000527827 PHTF1Q9UMS5 762 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 PLEKHM1Q9Y4G2 1056 aa23.52■■□□□ 1.36
CPSF1-202ENST00000527827 NPIPB15A6NHN6 443 aaPredicted RBP23.51■■□□□ 1.35
CPSF1-202ENST00000527827 ZW10O43264 779 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 PPFIA2O75334 1257 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 IVLP07476 585 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 CYP2A6P11509 494 aaPredicted RBP23.51■■□□□ 1.35
CPSF1-202ENST00000527827 CSF2RBP32927 897 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 HSPA9P38646 679 aaKnown RBP23.51■■□□□ 1.35
CPSF1-202ENST00000527827 ZNF135P52742 658 aaPredicted RBP23.51■■□□□ 1.35
CPSF1-202ENST00000527827 SQSTM1Q13501 440 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 TRA2AQ13595 282 aaKnown RBP eCLIP23.51■■□□□ 1.35
CPSF1-202ENST00000527827 TSPAN33Q86UF1 283 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 OR4D9Q8NGE8 314 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 SCARF2Q96GP6 870 aaPredicted RBP23.51■■□□□ 1.35
CPSF1-202ENST00000527827 MGME1Q9BQP7 344 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 SLC25A18Q9H1K4 315 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 ETNK2Q9NVF9 386 aa23.51■■□□□ 1.35
CPSF1-202ENST00000527827 IGHV1OR21-1A0A087WYE8 117 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 PSMD11O00231 422 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 ATP1A3P13637 1013 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 ATP1A2P50993 1020 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 RAET1GQ6H3X3 334 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 TECPR1Q7Z6L1 1165 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 SCRN2Q96FV2 425 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 MCCC1Q96RQ3 725 aaPredicted RBP23.5■■□□□ 1.35
CPSF1-202ENST00000527827 TMEM9Q9P0T7 183 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 B3GALT1Q9Y5Z6 326 aa23.5■■□□□ 1.35
CPSF1-202ENST00000527827 A0A0U1RQS6 177 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 GOLGA6CA6NDK9 693 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 GOLGA6BA6NDN3 693 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 MAFKO60675 156 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 PGLSO95336 258 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 SOD1P00441 154 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 GOLGA6DP0CG33 693 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 THRAP10827 490 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 CDK11BP21127 795 aaKnown RBP23.49■■□□□ 1.35
CPSF1-202ENST00000527827 AMPD1P23109 780 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 MPSTP25325 297 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 IL1R2P27930 398 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 UGT1A3P35503 534 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 MAXP61244 160 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 BIRC2Q13490 618 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 NCAPHQ15003 741 aa23.49■■□□□ 1.35
CPSF1-202ENST00000527827 DOK6Q6PKX4 331 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms