RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 TEKT5Q96M29 485 aa26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 RBM15Q96T37 977 aaKnown RBP eCLIP26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 MLPHQ9BV36 600 aaPredicted RBP26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 LGR4Q9BXB1 951 aa26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 HEMGNQ9BXL5 484 aa26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 TEX101Q9BY14 249 aa26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 GLOD4Q9HC38 313 aa26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 PHPT1Q9NRX4 125 aaPredicted RBP26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 U3KQA8 63 aa26.33■■□□□ 1.81
TSPAN4-217ENST00000527644 KNTC1P50748 2209 aa26.33■■□□□ 1.8
TSPAN4-217ENST00000527644 IGF2RP11717 2491 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 GRID2IPA4D2P6 1211 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 YY2O15391 372 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 MYCLP1P12525 358 aaPredicted RBP26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 STC1P52823 247 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 RWDD2BP57060 319 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 GSDMDP57764 484 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 FAM182AQ5T1J6 154 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 LVRNQ6Q4G3 990 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 ZC3H18Q86VM9 953 aaKnown RBP26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 SCG3Q8WXD2 468 aaKnown RBP26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 OR1E3Q8WZA6 343 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 GLMNQ92990 594 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 TADA1Q96BN2 335 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 PDXPQ96GD0 296 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 DESI2Q9BSY9 194 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 BOCQ9BWV1 1114 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 FGF22Q9HCT0 170 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 DOLKQ9UPQ8 538 aa26.32■■□□□ 1.8
TSPAN4-217ENST00000527644 ASPMQ8IZT6 3477 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 HACD1B0YJ81 288 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 APOC4-APOC2K7ER74 178 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 APOC2P02655 101 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 GP1BAP07359 652 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 MYF5P13349 255 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 JUPP14923 745 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 WASHC5Q12768 1159 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 C6orf132Q5T0Z8 1188 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 RAET1GQ6H3X3 334 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 NYAP1Q6ZVC0 841 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 ZNF765Q7L2R6 523 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 HEATR4Q86WZ0 1026 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 GKN2Q86XP6 184 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 NRSN1Q8IZ57 195 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 HAUS1Q96CS2 278 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 AP2M1Q96CW1 435 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 VAT1Q99536 393 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 ABCG8Q9H221 673 aa26.31■■□□□ 1.8
TSPAN4-217ENST00000527644 MACROD2A1Z1Q3 448 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 FAM149AA5PLN7 773 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 GOLGA6CA6NDK9 693 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 GOLGA6BA6NDN3 693 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 CLDN7O95471 211 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 PYGLP06737 847 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 CELA2BP08218 269 aaPredicted RBP26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 GOLGA6DP0CG33 693 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 PTPN7P35236 360 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 CETN2P41208 172 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 RPIAP49247 311 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 CDK3Q00526 305 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 XRCC4Q13426 336 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 CDKN3Q16667 212 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 HES3Q5TGS1 186 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 KCTD16Q68DU8 428 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 RFLNAQ6ZTI6 216 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 MARCH9Q86YJ5 346 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 SYCE1Q8N0S2 351 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 QKIQ96PU8 341 aaKnown RBP eCLIP26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 TRIB3Q96RU7 358 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 OSBPL8Q9BZF1 889 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 GOLGA6AQ9NYA3 693 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 CD84Q9UIB8 345 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 AMFRQ9UKV5 643 aa26.3■■□□□ 1.8
TSPAN4-217ENST00000527644 LRP4O75096 1905 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 C1orf232A0A0U1RR37 186 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 GPR1P46091 355 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 INSM1Q01101 510 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 CDK18Q07002 472 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 NR0B2Q15466 257 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 CCDC181Q5TID7 509 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 PEX26Q7Z412 305 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 CACTIN-AS1Q8N1I8 211 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 CCHCR1Q8TD31 782 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 HTR3CQ8WXA8 447 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 MRPL40Q9NQ50 206 aaKnown RBP26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 TRIM10Q9UDY6 481 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 USP24Q9UPU5 2620 aa26.29■■□□□ 1.8
TSPAN4-217ENST00000527644 PRSS38A1L453 326 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 EME2A4GXA9 379 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 MT-CYBP00156 380 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 CAMK2BQ13554 666 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 GALNT3Q14435 633 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 ADAMTSL4Q6UY14 1074 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 KDELC2Q7Z4H8 507 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 SPATA22Q8NHS9 363 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 IFI44Q8TCB0 444 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 ALG3Q92685 438 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 SCAMP4Q969E2 229 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 CYP4F12Q9HCS2 524 aa26.28■■□□□ 1.8
TSPAN4-217ENST00000527644 MOSPD1Q9UJG1 213 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms