RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ZBTB49Q6ZSB9 765 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 DYMQ7RTS9 669 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 FRMD5Q7Z6J6 570 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 USP37Q86T82 979 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 DNAAF5Q86Y56 855 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 GPALPP1Q8IXQ4 340 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 RCOR2Q8IZ40 523 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 ZNF654Q8IZM8 581 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 DSELQ8IZU8 1212 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 LGI2Q8N0V4 545 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 PGAM4Q8N0Y7 254 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 UBR7Q8N806 425 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 ZNF565Q8N9K5 539 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 KYQ8NBH2 561 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 XXYLT1Q8NBI6 393 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 KCNH5Q8NCM2 988 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 OR5T2Q8NGG2 359 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 OR10T2Q8NGX3 314 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 PSMA8Q8TAA3 256 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 LNX1Q8TBB1 728 aaPredicted RBP5.82□□□□□ -1.48
CD44-225ENST00000527326 SETD6Q8TBK2 473 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 GANCQ8TET4 914 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 TFB1MQ8WVM0 346 aaKnown RBP5.82□□□□□ -1.48
CD44-225ENST00000527326 SMG7Q92540 1137 aaKnown RBP5.82□□□□□ -1.48
CD44-225ENST00000527326 CD101Q93033 1021 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 YIPF5Q969M3 257 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 FBXW5Q969U6 566 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 NUDT16Q96DE0 195 aaKnown RBP5.82□□□□□ -1.48
CD44-225ENST00000527326 EEF2KMTQ96G04 330 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 CALML4Q96GE6 196 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 ART5Q96L15 291 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 MAGEB10Q96LZ2 347 aaPredicted RBP5.82□□□□□ -1.48
CD44-225ENST00000527326 SERPINB11Q96P15 392 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 PSMG3-AS1Q96PY0 264 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 FAM111AQ96PZ2 611 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 TBCBQ99426 244 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 PAFAH2Q99487 392 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 C12orf57Q99622 126 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 CINPQ9BW66 212 aaPredicted RBP5.82□□□□□ -1.48
CD44-225ENST00000527326 GPR88Q9GZN0 384 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 AKTIPQ9H8T0 292 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 MCCC2Q9HCC0 563 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 TUFT1Q9NNX1 390 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 PRDM11Q9NQV5 511 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 ABCB10Q9NRK6 738 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD44-225ENST00000527326 TMEM216Q9P0N5 145 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 SRRDQ9UH36 339 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 PFDN2Q9UHV9 154 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 MAD2L2Q9UI95 211 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 ANAPC2Q9UJX6 822 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 ACSL5Q9ULC5 683 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 SHOC2Q9UQ13 582 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 MRPS7Q9Y2R9 242 aaKnown RBP5.82□□□□□ -1.48
CD44-225ENST00000527326 A3GALT2U3KPV4 340 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 PEAK1Q9H792 1746 aa5.82□□□□□ -1.48
CD44-225ENST00000527326 IGSF9BQ9UPX0 1349 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PQLC2LA1A4F0 135 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 FAM170AA1A519 330 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 GOLGA8SH3BPF8 625 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 I3L521 148 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 PLOD2O00469 737 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 EIF1AYO14602 144 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 TFECO14948 347 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 SORBS2O94875 1100 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 GABARAPO95166 117 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 SEC24AO95486 1093 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 POP4O95707 220 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 LDOC1O95751 146 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 TGM6O95932 706 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 KRT18P05783 430 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 PLA2G4BP0C869 781 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TRIM49P0CI25 452 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TRIM49CP0CI26 452 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 HPGDP15428 266 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 NELFEP18615 380 aaKnown RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 NCF2P19878 526 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 TNFAIP3P21580 790 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 ADSSP30520 456 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 CYP2C18P33260 490 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 SOX5P35711 763 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 HMGCLP35914 325 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 GJC1P36383 396 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 CAPGP40121 348 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 IL15P40933 162 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 SOX9P48436 509 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 DGKQP52824 942 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 HSD17B7P56937 341 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 GPC5P78333 572 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 MPP1Q00013 466 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 GAD2Q05329 585 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 SLC13A2Q13183 592 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 AQP6Q13520 282 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 STARD3Q14849 445 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 TRIP4Q15650 581 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 LTB4RQ15722 352 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 CHI3L2Q15782 390 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 CARTPTQ16568 116 aa5.81□□□□□ -1.48
CD44-225ENST00000527326 KCTD19Q17RG1 926 aaPredicted RBP5.81□□□□□ -1.48
CD44-225ENST00000527326 GEN1Q17RS7 908 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms