RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 LRRC14Q15048 493 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 TRIM61Q5EBN2 209 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 TPRG1LQ5T0D9 272 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 DENND2CQ68D51 928 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 ESRP1Q6NXG1 681 aaKnown RBP16.62■□□□□ 0.25
SMCO4-204ENST00000527149 ZNF765Q7L2R6 523 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 RABEPKQ7Z6M1 372 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 IQCHQ86VS3 1027 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 SLC22A18ASQ8N1D0 253 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 PLA2G15Q8NCC3 412 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 OR52K1Q8NGK4 314 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 CEP76Q8TAP6 659 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 BLOC1S5Q8TDH9 187 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 SRPK1Q96SB4 655 aaKnown RBP16.62■□□□□ 0.25
SMCO4-204ENST00000527149 C1QTNF7Q9BXJ2 289 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 ABCG8Q9H221 673 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 AASDHPPTQ9NRN7 309 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 PIH1D1Q9NWS0 290 aaKnown RBP16.62■□□□□ 0.25
SMCO4-204ENST00000527149 HACD3Q9P035 362 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 HS3ST3A1Q9Y663 406 aa16.62■□□□□ 0.25
SMCO4-204ENST00000527149 LRP4O75096 1905 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 A0A1B0GVT2 93 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 GOLGA8CPA6NN73 597 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 PRR5-ARHGAP8B1AHC4 643 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 E7EVH7 732 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 CD38P28907 300 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 DEKP35659 375 aaKnown RBP16.61■□□□□ 0.25
SMCO4-204ENST00000527149 HMGCLP35914 325 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 CSNK1EP49674 416 aaKnown RBP16.61■□□□□ 0.25
SMCO4-204ENST00000527149 ZNF140P52738 457 aaPredicted RBP16.61■□□□□ 0.25
SMCO4-204ENST00000527149 DCDC1P59894 354 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 CDK16Q00536 496 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 CKAP4Q07065 602 aaKnown RBP16.61■□□□□ 0.25
SMCO4-204ENST00000527149 DPTQ07507 201 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 GRIK2Q13002 908 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 SF3A2Q15428 464 aaKnown RBP16.61■□□□□ 0.25
SMCO4-204ENST00000527149 PPP1R7Q15435 360 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 CSRP2Q16527 193 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 SYDE1Q6ZW31 735 aaPredicted RBP16.61■□□□□ 0.25
SMCO4-204ENST00000527149 LINC00523Q86TU6 105 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 MFSD2AQ8NA29 543 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 OR13H1Q8NG92 308 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 SCAMP4Q969E2 229 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 TRIM51Q9BSJ1 452 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 FSCN3Q9NQT6 498 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 SEMA4GQ9NTN9 838 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 IL17CQ9P0M4 197 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 CD84Q9UIB8 345 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 SLC6A14Q9UN76 642 aa16.61■□□□□ 0.25
SMCO4-204ENST00000527149 ASCC3Q8N3C0 2202 aaKnown RBP16.61■□□□□ 0.25
SMCO4-204ENST00000527149 LNP1A1A4G5 178 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 RGSL1A5PLK6 1076 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 A6NNZ2 444 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 TP73O15350 636 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 LDB2O43679 373 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 GFRA3O60609 400 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 SLC4A1P02730 911 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 CFIP05156 583 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 BPIP17213 487 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 NXPH1P58417 271 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 IRX4P78413 519 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 CDH17Q12864 832 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 OVGP1Q12889 678 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 MTM1Q13496 603 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 TUBB2AQ13885 445 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 HENMT1Q5T8I9 393 aaKnown RBP16.6■□□□□ 0.25
SMCO4-204ENST00000527149 RNASEH2BQ5TBB1 312 aaKnown RBP16.6■□□□□ 0.25
SMCO4-204ENST00000527149 GLT6D1Q7Z4J2 308 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 NLRP8Q86W28 1048 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 SPATS2Q86XZ4 545 aaKnown RBP16.6■□□□□ 0.25
SMCO4-204ENST00000527149 NRSN1Q8IZ57 195 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 NAT8LQ8N9F0 302 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 BRSK1Q8TDC3 778 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 LRRC45Q96CN5 670 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 TUBB2BQ9BVA1 445 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 GPR63Q9BZJ6 419 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 RXFP3Q9NSD7 469 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 ARL5AQ9Y689 179 aa16.6■□□□□ 0.25
SMCO4-204ENST00000527149 TLR4O00206 839 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 GAPDHSO14556 408 aaPredicted RBP16.59■□□□□ 0.25
SMCO4-204ENST00000527149 DNALI1O14645 258 aaPredicted RBP16.59■□□□□ 0.25
SMCO4-204ENST00000527149 FPGTO14772 594 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 RAD51CO43502 376 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 PCCBP05166 539 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 TPH1P17752 444 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 PSMA3P25788 255 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 TEAD1P28347 426 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 TRIM23P36406 574 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 PLA2G5P39877 138 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 CTSKP43235 329 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 MRPS25P82663 173 aaKnown RBP16.59■□□□□ 0.25
SMCO4-204ENST00000527149 INPP5AQ14642 412 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 PTPRCAPQ14761 206 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 STAT4Q14765 748 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 TAF1AQ15573 450 aaPredicted RBP16.59■□□□□ 0.25
SMCO4-204ENST00000527149 KIF19Q2TAC6 998 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 PTAR1Q7Z6K3 402 aaPredicted RBP16.59■□□□□ 0.25
SMCO4-204ENST00000527149 GPR26Q8NDV2 337 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 FAM174AQ8TBP5 190 aa16.59■□□□□ 0.25
SMCO4-204ENST00000527149 CCHCR1Q8TD31 782 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms