RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 KAZNQ674X7 775 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 VASH2Q86V25 355 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 JAMLQ86YT9 394 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 RFX6Q8HWS3 928 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 DCP2Q8IU60 420 aaKnown RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 SLC22A18ASQ8N1D0 253 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 FBXO39Q8N4B4 442 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 TEX26Q8N6G2 289 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 ZNF548Q8NEK5 533 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 OR13H1Q8NG92 308 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 COG1Q8WTW3 980 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 RBM41Q96IZ5 413 aaKnown RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 PHF12Q96QT6 1004 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 SLC12A9Q9BXP2 914 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 CARD9Q9H257 536 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 GPR27Q9NS67 375 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 IPO11Q9UI26 975 aaKnown RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 CA5BQ9Y2D0 317 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 R3HDM2Q9Y2K5 976 aaKnown RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 PRRC2CQ9Y520 2896 aaKnown RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 LRP4O75096 1905 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 GOLGA6L9A6NEM1 432 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 DFFAO00273 331 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 TPP1O14773 563 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 IL1BP01584 269 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 NME1P15531 152 aaKnown RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 ETFBP38117 255 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 DYNLT1P63172 113 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 IL10RBQ08334 325 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 PPIDQ08752 370 aaKnown RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 NR0B2Q15466 257 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 INO80DQ53TQ3 878 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 ZFYVE27Q5T4F4 411 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 AGBL4Q5VU57 503 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 PAPD7Q5XG87 772 aaKnown RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 ABI3BPQ7Z7G0 1075 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 SLC13A5Q86YT5 568 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 CCDC117Q8IWD4 279 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 STK40Q8N2I9 435 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 RASGEF1CQ8N431 466 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 UBL4BQ8N7F7 174 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 CNTD1Q8N815 330 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 OR2A12Q8NGT7 310 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 SSC4DQ8WTU2 575 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 MAML1Q92585 1016 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 FATE1Q969F0 183 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 HDAC11Q96DB2 347 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 ALS2CR12Q96Q35 445 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 C2orf49Q9BVC5 232 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 BOCQ9BWV1 1114 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 STRADBQ9C0K7 418 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 C10orf88Q9H8K7 445 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 LHX3Q9UBR4 397 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 FCF1Q9Y324 198 aaKnown RBP10.98□□□□□ -0.65
NEDD8-204ENST00000526430 APCP25054 2843 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 ADGRG4Q8IZF6 3080 aa10.98□□□□□ -0.65
NEDD8-204ENST00000526430 MED13LQ71F56 2210 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 ARHGAP42A6NI28 874 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 H3BM21 787 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 APOC4-APOC2K7ER74 178 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 ZNF185O15231 689 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 INSIG1O15503 277 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 KIF5CO60282 957 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 TMCC1O94876 653 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 AGFG2O95081 481 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 APOC2P02655 101 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CSF2P04141 144 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CTSLP07711 333 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CCNCP24863 283 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CD82P27701 267 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CCKBRP32239 447 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 RPIAP49247 311 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 METAP1P53582 386 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 GNG11P61952 73 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 OTUD4Q01804 1114 aaKnown RBP10.97□□□□□ -0.65
NEDD8-204ENST00000526430 TFDP2Q14188 446 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 PRKD1Q15139 912 aaPredicted RBP10.97□□□□□ -0.65
NEDD8-204ENST00000526430 NOMO1Q15155 1222 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 POM121L1PQ3SYA9 428 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 RETSATQ6NUM9 610 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 NEK5Q6P3R8 708 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CRTC1Q6UUV9 634 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 LRRC49Q8IUZ0 686 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CCDC50Q8IVM0 306 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CHST14Q8NCH0 376 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 SLC35B2Q8TB61 432 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 ACTL9Q8TC94 416 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 ISG20Q96AZ6 181 aaKnown RBP10.97□□□□□ -0.65
NEDD8-204ENST00000526430 MS4A14Q96JA4 679 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 IL12RB2Q99665 862 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 FAM118BQ9BPY3 351 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 MAK16Q9BXY0 300 aaKnown RBP10.97□□□□□ -0.65
NEDD8-204ENST00000526430 B3GNT4Q9C0J1 378 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 TNKS2Q9H2K2 1166 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 CAAP1Q9H8G2 361 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 DNAJC28Q9NX36 388 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 DONSONQ9NYP3 566 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms