RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 DENND6AQ8IWF6 608 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 ENGASEQ8NFI3 743 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 TMEM170AQ8WVE7 144 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 WASF1Q92558 559 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 INPP5DQ92835 1189 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 APOLD1Q96LR9 279 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 CAMK1GQ96NX5 476 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 H2AFJQ9BTM1 129 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 NPFFR1Q9GZQ6 430 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 MVB12BQ9H7P6 319 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 PCDHB16Q9NRJ7 776 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 OLA1Q9NTK5 396 aaKnown RBP4.02□□□□□ -1.77
CD44-219ENST00000525685 C20orf141Q9NUB4 165 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 ZNF69Q9UC07 566 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.02□□□□□ -1.77
CD44-219ENST00000525685 CICQ96RK0 1608 aaPredicted RBP4.02□□□□□ -1.77
CD44-219ENST00000525685 DLG5Q8TDM6 1919 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 C5P01031 1676 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 SNAP23O00161 211 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 VWA5AO00534 786 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 ASAP2O43150 1006 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 CLDN7O95471 211 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 UBL4AP11441 157 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 CENPAP49450 140 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 HTR6P50406 440 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 SELENOVP59797 346 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 MPP1Q00013 466 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 GOLGA8DPQ0D2H9 430 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 LPIN1Q14693 890 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 GSTA3Q16772 222 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 MTHFSDQ2M296 383 aaKnown RBP4.01□□□□□ -1.77
CD44-219ENST00000525685 DCAF6Q58WW2 860 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 DNTTIP2Q5QJE6 756 aaKnown RBP4.01□□□□□ -1.77
CD44-219ENST00000525685 FNBP1LQ5T0N5 605 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 ZNF367Q7RTV3 350 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 SLC46A3Q7Z3Q1 461 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 TDRPQ86YL5 185 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 DIS3L2Q8IYB7 885 aaKnown RBP4.01□□□□□ -1.77
CD44-219ENST00000525685 RBFAQ8N0V3 343 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 PELI3Q8N2H9 469 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 PPHLN1Q8NEY8 458 aaKnown RBP4.01□□□□□ -1.77
CD44-219ENST00000525685 GJC3Q8NFK1 279 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 KCNG4Q8TDN1 519 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 RFFLQ8WZ73 363 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 ZNF570Q96NI8 536 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 AGXT2Q9BYV1 514 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 KLHL31Q9H511 634 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 BPIFA1Q9NP55 256 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 ORC3Q9UBD5 711 aaPredicted RBP4.01□□□□□ -1.77
CD44-219ENST00000525685 AASSQ9UDR5 926 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 NAALADL1Q9UQQ1 740 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 NUDCQ9Y266 331 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 INSL5Q9Y5Q6 135 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 UBR2Q8IWV8 1755 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 COL5A3P25940 1745 aaPredicted RBP4.01□□□□□ -1.77
CD44-219ENST00000525685 TJP1Q07157 1748 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 MAP3K5Q99683 1374 aa4.01□□□□□ -1.77
CD44-219ENST00000525685 TAF1LQ8IZX4 1826 aa4□□□□□ -1.77
CD44-219ENST00000525685 TUBGCP6Q96RT7 1819 aa4□□□□□ -1.77
CD44-219ENST00000525685 CASZ1Q86V15 1759 aa4□□□□□ -1.77
CD44-219ENST00000525685 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4□□□□□ -1.77
CD44-219ENST00000525685 FAM90A8PA6NJQ4 464 aa4□□□□□ -1.77
CD44-219ENST00000525685 OR6C75A6NL08 312 aa4□□□□□ -1.77
CD44-219ENST00000525685 EBAG9O00559 213 aa4□□□□□ -1.77
CD44-219ENST00000525685 TNFRSF13BO14836 293 aaPredicted RBP4□□□□□ -1.77
CD44-219ENST00000525685 BCAT2O15382 392 aaPredicted RBP4□□□□□ -1.77
CD44-219ENST00000525685 HNRNPCL1O60812 293 aaKnown RBP4□□□□□ -1.77
CD44-219ENST00000525685 RGS11O94810 467 aa4□□□□□ -1.77
CD44-219ENST00000525685 CD4P01730 458 aa4□□□□□ -1.77
CD44-219ENST00000525685 HSP90AB1P08238 724 aaKnown RBP4□□□□□ -1.77
CD44-219ENST00000525685 FAM90A13PP0C7W8 464 aa4□□□□□ -1.77
CD44-219ENST00000525685 FAM90A24PP0C7X0 464 aa4□□□□□ -1.77
CD44-219ENST00000525685 NAGAP17050 411 aa4□□□□□ -1.77
CD44-219ENST00000525685 RASSF2P50749 326 aa4□□□□□ -1.77
CD44-219ENST00000525685 DCTN2Q13561 401 aaKnown RBP4□□□□□ -1.77
CD44-219ENST00000525685 PKP1Q13835 747 aa4□□□□□ -1.77
CD44-219ENST00000525685 TSTQ16762 297 aaKnown RBP4□□□□□ -1.77
CD44-219ENST00000525685 CCDC184Q52MB2 194 aa4□□□□□ -1.77
CD44-219ENST00000525685 C1orf141Q5JVX7 400 aa4□□□□□ -1.77
CD44-219ENST00000525685 HAUS3Q68CZ6 603 aa4□□□□□ -1.77
CD44-219ENST00000525685 LRRC8EQ6NSJ5 796 aa4□□□□□ -1.77
CD44-219ENST00000525685 DSTYKQ6XUX3 929 aa4□□□□□ -1.77
CD44-219ENST00000525685 H1FNTQ75WM6 255 aaPredicted RBP4□□□□□ -1.77
CD44-219ENST00000525685 MEPCEQ7L2J0 689 aaKnown RBP4□□□□□ -1.77
CD44-219ENST00000525685 PATL1Q86TB9 770 aaKnown RBP4□□□□□ -1.77
CD44-219ENST00000525685 MB21D2Q8IYB1 491 aaPredicted RBP4□□□□□ -1.77
CD44-219ENST00000525685 PARP16Q8N5Y8 322 aa4□□□□□ -1.77
CD44-219ENST00000525685 MCPH1Q8NEM0 835 aa4□□□□□ -1.77
CD44-219ENST00000525685 CADM4Q8NFZ8 388 aa4□□□□□ -1.77
CD44-219ENST00000525685 ETNPPLQ8TBG4 499 aa4□□□□□ -1.77
CD44-219ENST00000525685 METTL6Q8TCB7 284 aa4□□□□□ -1.77
CD44-219ENST00000525685 ADAMTS15Q8TE58 950 aa4□□□□□ -1.77
CD44-219ENST00000525685 SKA1Q96BD8 255 aa4□□□□□ -1.77
CD44-219ENST00000525685 LYZL4Q96KX0 146 aa4□□□□□ -1.77
CD44-219ENST00000525685 LBHD1Q9BQE6 289 aaPredicted RBP4□□□□□ -1.77
CD44-219ENST00000525685 PLAC1Q9HBJ0 212 aa4□□□□□ -1.77
CD44-219ENST00000525685 KRT84Q9NSB2 600 aa4□□□□□ -1.77
CD44-219ENST00000525685 ANKRD10Q9NXR5 420 aa4□□□□□ -1.77
CD44-219ENST00000525685 NDRG3Q9UGV2 375 aa4□□□□□ -1.77
CD44-219ENST00000525685 FZD10Q9ULW2 581 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms