RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 TRMUO75648 421 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 TCEA1P23193 301 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 RPL3P39023 403 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 OR2B6P58173 313 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 ALG1LQ6GMV1 187 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 TDRPQ86YL5 185 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 TMEM68Q96MH6 324 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 TRPV4Q9HBA0 871 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 FARSAQ9Y285 508 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 FXYD6-FXYD2A0A087WZ82 144 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 TRDMT1O14717 391 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 GZMAP12544 262 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 SP100P23497 879 aaPredicted RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 IGFBP5P24593 272 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 EPHA3P29320 983 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 MANFP55145 182 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 VLDLRP98155 873 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 LSM12Q3MHD2 195 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 ATP13A4Q4VNC1 1196 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 CADM2Q8N3J6 435 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 FXYD6Q9H0Q3 95 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 TET3O43151 1660 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 URADA6NGE7 173 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 OR6C70A6NIJ9 312 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 MATN2O00339 956 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 PER2O15055 1255 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 LSM8O95777 96 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 CYB5AP00167 134 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 UQCRC1P31930 480 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 CD86P42081 329 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 HUNKP57058 714 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 PPATQ06203 517 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 GALNT15Q8N3T1 639 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 OR10G6Q8NH81 332 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 CDK5RAP1Q96SZ6 601 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 PFDN5Q99471 154 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 ZNF649Q9BS31 505 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 PXMP2Q9NR77 195 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 ISM1B1AKI9 464 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 VMACQ2NL98 169 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 ALG10Q5BKT4 473 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 NEPROQ6NW34 567 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 OR5J2Q8NH18 312 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 CXorf40AQ8TE69 158 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 EZH1Q92800 747 aaPredicted RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 CD101Q93033 1021 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 PARK7Q99497 189 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 ZNF226Q9NYT6 803 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 TOR1BO14657 336 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 AIREO43918 545 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 POLR2LP62875 67 aaKnown RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 GRK1Q15835 563 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 SLC25A25Q6KCM7 469 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 KCNT2Q6UVM3 1135 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 TPGS1Q6ZTW0 290 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 GPRIN3Q6ZVF9 776 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 HDAC7Q8WUI4 952 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 PPCDCQ96CD2 204 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 KXD1Q9BQD3 176 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 PARPBPQ9NWS1 579 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 ALKBH4Q9NXW9 302 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 NR2E1Q9Y466 385 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 ARL5AQ9Y689 179 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
LRRK1-202ENST00000525284 QSOX1O00391 747 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 RARAP10276 462 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 FUT4P22083 530 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 RBM34P42696 430 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 NR2C2P49116 596 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 LIPEQ05469 1076 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CPSF6Q16630 551 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 BRSK1Q8TDC3 778 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 TAAR1Q96RJ0 339 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 LACRTQ9GZZ8 138 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 RBL1P28749 1068 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 ECT2LQ008S8 904 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 ACVR2BQ13705 512 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 MFSD10Q14728 455 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 RNF180Q86T96 592 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 SPPL2CQ8IUH8 684 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CD302Q8IX05 232 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 NKAPQ8N5F7 415 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 TAS1R2Q8TE23 839 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 RELTQ969Z4 430 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 B3GNT4Q9C0J1 378 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 TFEBP19484 476 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 VARSP26640 1264 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 DRG2P55039 364 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 DPYSL3Q14195 570 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 ANXA8L1Q5VT79 327 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 TRIM74Q86UV6 250 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 TRIM73Q86UV7 250 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CHERPQ8IWX8 916 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 OR52K1Q8NGK4 314 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CLPTM1LQ96KA5 538 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 GLT1D1Q96MS3 346 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms