RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TRIM7Q9C029 511 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 ST14Q9Y5Y6 855 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 ZW10O43264 779 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 HTRA2O43464 458 aaPredicted RBP23.92■■□□□ 1.42
USP47-205ENST00000525257 SOCS5O75159 536 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 PPFIA2O75334 1257 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 FGF3P11487 239 aaPredicted RBP23.92■■□□□ 1.42
USP47-205ENST00000525257 TNFAIP3P21580 790 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 MIPP30301 263 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 POLD2P49005 469 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 ARSDP51689 593 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 CDK3Q00526 305 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 NKAIN2Q5VXU1 208 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 RAET1GQ6H3X3 334 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 PLEKHA7Q6IQ23 1121 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 ZNF599Q96NL3 588 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 TAAR9Q96RI9 348 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 CWC15Q9P013 229 aaKnown RBP23.92■■□□□ 1.42
USP47-205ENST00000525257 COL12A1Q99715 3063 aa23.92■■□□□ 1.42
USP47-205ENST00000525257 RNF8O76064 485 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 CCDC172P0C7W6 258 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 LHCGRP22888 699 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 ATP1A2P50993 1020 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 CTBSQ01459 385 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 DPYSQ14117 519 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 PTPRRQ15256 657 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 CLPPQ16740 277 aaPredicted RBP23.91■■□□□ 1.42
USP47-205ENST00000525257 DOK6Q6PKX4 331 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 IRF2BP2Q7Z5L9 587 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 NAGSQ8N159 534 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 SPOCK2Q92563 424 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 NKD1Q969G9 470 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 SYT11Q9BT88 431 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 KCTD5Q9NXV2 234 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 FLNCQ14315 2725 aa23.91■■□□□ 1.42
USP47-205ENST00000525257 TMEM191CA6NGB0 347 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 PPM1DO15297 605 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 CYP2A6P11509 494 aaPredicted RBP23.9■■□□□ 1.42
USP47-205ENST00000525257 CDK11BP21127 795 aaKnown RBP23.9■■□□□ 1.42
USP47-205ENST00000525257 MPSTP25325 297 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 ADCY8P40145 1251 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 GPR3P46089 330 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 LIMK2P53671 638 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 MYL5Q02045 173 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 TRAF2Q12933 501 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 Q6ZVL8 140 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 PGBD5Q8N414 524 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 NUDCD1Q96RS6 583 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 SLC12A9Q9BXP2 914 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 SLC25A18Q9H1K4 315 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 NOD2Q9HC29 1040 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 GEMIN8Q9NWZ8 242 aaKnown RBP23.9■■□□□ 1.42
USP47-205ENST00000525257 PLEKHM1Q9Y4G2 1056 aa23.9■■□□□ 1.42
USP47-205ENST00000525257 A0A1W2PQ67 120 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 NPIPB15A6NHN6 443 aaPredicted RBP23.89■■□□□ 1.41
USP47-205ENST00000525257 CR2P20023 1033 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 CSF2RBP32927 897 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 HCAR3P49019 387 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 TRA2AQ13595 282 aaKnown RBP eCLIP23.89■■□□□ 1.41
USP47-205ENST00000525257 PPP1R2P3Q6NXS1 205 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 TSPAN33Q86UF1 283 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 LZTR1Q8N653 840 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 IL22RA1Q8N6P7 574 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 OR4D9Q8NGE8 314 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 ART4Q93070 314 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 ZMYND15Q9H091 742 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 TMEM9Q9P0T7 183 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 PHTF1Q9UMS5 762 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 SLC17A4Q9Y2C5 497 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 PCDHGA3Q9Y5H0 932 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 B3GALT1Q9Y5Z6 326 aa23.89■■□□□ 1.41
USP47-205ENST00000525257 IGHV1OR21-1A0A087WYE8 117 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 LRCH4O75427 683 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 PEX11BO96011 259 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 IVLP07476 585 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 NFKBIAP25963 317 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 CSTF2P33240 577 aaKnown RBP eCLIP23.88■■□□□ 1.41
USP47-205ENST00000525257 HSPA9P38646 679 aaKnown RBP23.88■■□□□ 1.41
USP47-205ENST00000525257 ACTR1BP42025 376 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 ZNF135P52742 658 aaPredicted RBP23.88■■□□□ 1.41
USP47-205ENST00000525257 ACTR1AP61163 376 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 MAXP61244 160 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 APTXQ7Z2E3 356 aaKnown RBP23.88■■□□□ 1.41
USP47-205ENST00000525257 PSTKQ8IV42 348 aaKnown RBP23.88■■□□□ 1.41
USP47-205ENST00000525257 CBARPQ8N350 705 aaPredicted RBP23.88■■□□□ 1.41
USP47-205ENST00000525257 AGBL5Q8NDL9 886 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 CCDC112Q8NEF3 446 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 CDH19Q9H159 772 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 ZWILCHQ9H900 591 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 ETNK2Q9NVF9 386 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 KCNK4Q9NYG8 393 aa23.88■■□□□ 1.41
USP47-205ENST00000525257 A0A0U1RQS6 177 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 PSMD11O00231 422 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 THRAP10827 490 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 LIFP15018 202 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 CTPS1P17812 591 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 UGT1A3P35503 534 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 PEX6Q13608 980 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 BORAQ6PGQ7 559 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 MGME1Q9BQP7 344 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms