RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PIK3C3Q8NEB9 887 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 REPS2Q8NFH8 660 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 AKR7LQ8NHP1 331 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SUN3Q8TAQ9 357 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 RNASE8Q8TDE3 154 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 NSMCE1Q8WV22 266 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PSPC1Q8WXF1 523 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 RAB40AQ8WXH6 277 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SEC14L1Q92503 715 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 CNOT9Q92600 299 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 GTF3C6Q969F1 213 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 TMIGD2Q96BF3 282 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 LRRC39Q96DD0 335 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ELMOD3Q96FG2 381 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 ZNF668Q96K58 619 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 FCRL2Q96LA5 508 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 EIF3CQ99613 913 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 SH3GL1Q99961 368 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 MTG1Q9BT17 334 aaPredicted RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 INPP5KQ9BT40 448 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 MMTAG2Q9BU76 263 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 DUSP23Q9BVJ7 150 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 BTBD2Q9BX70 525 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 TBC1D10AQ9BXI6 508 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 CLPBQ9H078 707 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 NUAK2Q9H093 628 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 OR10A5Q9H207 317 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SEMA6CQ9H3T2 930 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 GOLPH3LQ9H4A5 285 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PDZD7Q9H5P4 517 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 PNPLA3Q9NST1 481 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 SETD4Q9NVD3 440 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 TBC1D13Q9NVG8 400 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 THAP1Q9NVV9 213 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 JKAMPQ9P055 326 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 TBC1D7Q9P0N9 293 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 KCNN3Q9UGI6 736 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 DBR1Q9UK59 544 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 SLC45A2Q9UMX9 530 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 NUDCQ9Y266 331 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 MRPS7Q9Y2R9 242 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 C15orf41Q9Y2V0 281 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 MRPS2Q9Y399 296 aaKnown RBP4.51□□□□□ -1.69
CD44-213ENST00000525209 NUP160Q12769 1436 aa4.51□□□□□ -1.69
CD44-213ENST00000525209 KIAA1217Q5T5P2 1943 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 GAKO14976 1311 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 GSAPA4D1B5 854 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 GOLGA8OA6NCC3 632 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 WIPF3A6NGB9 483 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 C5orf52A6NGY3 159 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SDR42E2A6NKP2 422 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 ZNF879B4DU55 563 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 HSBP1L1C9JCN9 74 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 GOLGA8NF8WBI6 632 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 GRM8O00222 908 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 ST8SIA3O43173 380 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 DYNC1LI2O43237 492 aaPredicted RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 CTIFO43310 598 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 RGS10O43665 173 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 TACC1O75410 805 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SMC2O95347 1197 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 TRUB2O95900 331 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 OTCP00480 354 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 KRT14P02533 472 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CSF2P04141 144 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 RLN1P04808 185 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 IVLP07476 585 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 GLB1P16278 677 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 PRKCAP17252 672 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CALB2P22676 271 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SLC6A4P31645 630 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 OTX2P32243 289 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 S100A5P33763 92 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 HTR7P34969 479 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 THBS4P35443 961 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 ALDH1A3P47895 512 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 MVDP53602 400 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 PTTG1IPP53801 180 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 GAD2Q05329 585 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 HSPA14Q0VDF9 509 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 BNIP3Q12983 259 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 LCP2Q13094 533 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CDK5R2Q13319 367 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SNTB2Q13425 540 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 TSTA3Q13630 321 aaPredicted RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 ZRSR1Q15695 479 aaKnown RBP4.5□□□□□ -1.69
CD44-213ENST00000525209 UGP2Q16851 508 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 P3H1Q32P28 736 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 MGAT5BQ3V5L5 792 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CBWD6Q4V339 395 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 KLHL26Q53HC5 615 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 RUNDC3AQ59EK9 446 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CBWD3Q5JTY5 395 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 SH2D4BQ5SQS7 431 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CDKAL1Q5VV42 579 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 CD276Q5ZPR3 534 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 AAGABQ6PD74 315 aa4.5□□□□□ -1.69
CD44-213ENST00000525209 TSSK4Q6SA08 328 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms