RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 AARSP49588 968 aaKnown RBP eCLIP7.2□□□□□ -1.26
NEDD8-203ENST00000524927 COPAP53621 1224 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 LTBQ06643 244 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 ENPP2Q13822 863 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SURF1Q15526 300 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 FAM214AQ32MH5 1076 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SLC45A4Q5BKX6 768 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 LRCH2Q5VUJ6 765 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 FAM111BQ6SJ93 734 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SRLQ86TD4 932 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 TICAM2Q86XR7 235 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 XYLT1Q86Y38 959 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SLC25A45Q8N413 288 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 FBXO39Q8N4B4 442 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SRBD1Q8N5C6 995 aaKnown RBP7.2□□□□□ -1.26
NEDD8-203ENST00000524927 OTUD7AQ8TE49 926 aaPredicted RBP7.2□□□□□ -1.26
NEDD8-203ENST00000524927 ARRDC3Q96B67 414 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 APOLD1Q96LR9 279 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 C1orf43Q9BWL3 253 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SEC61A2Q9H9S3 476 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 KIAA1586Q9HCI6 787 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 KLHL11Q9NVR0 708 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 SNX13Q9Y5W8 968 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 PKDREJQ9NTG1 2253 aa7.2□□□□□ -1.26
NEDD8-203ENST00000524927 A0A0D9SFI3 127 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 TCRBV7S2A1N4TA0A589 114 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 RHPN2P1A8MT19 583 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 CXorf49A8MYA2 514 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 PRSS44E7EML9 344 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 SH2B2O14492 632 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 IFIT3O14879 490 aaKnown RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 STC2O76061 302 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 NOL4O94818 638 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 CENPBP07199 599 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 ALPPL2P10696 532 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 RNASE9P60153 205 aaKnown RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 RAP2BP61225 183 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 SLC7A9P82251 487 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 BMT2Q1RMZ1 405 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 SLC39A12Q504Y0 691 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 ZRANB3Q5FWF4 1079 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 KIAA0895LQ68EN5 471 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 ASB18Q6ZVZ8 466 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 CYB5R4Q7L1T6 521 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 DSG4Q86SJ6 1040 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 ZNF589Q86UQ0 364 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 TAX1BP1Q86VP1 789 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 PPP1R3BQ86XI6 285 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 FAM186BQ8IYM0 893 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 GPR135Q8IZ08 494 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 ZNF276Q8N554 614 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 ACRBPQ8NEB7 543 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 CENPTQ96BT3 561 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 APIPQ96GX9 242 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 ZMAT2Q96NC0 199 aaKnown RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 ZCWPW1Q9H0M4 648 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 MRPL46Q9H2W6 279 aaKnown RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 NELFAQ9H3P2 528 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 TMPRSS5Q9H3S3 457 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 TTC12Q9H892 705 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 SGK2Q9HBY8 427 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 NLRC4Q9NPP4 1024 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 XPNPEP1Q9NQW7 623 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 PIH1D1Q9NWS0 290 aaKnown RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 SIDT1Q9NXL6 827 aaKnown RBP7.19□□□□□ -1.26
NEDD8-203ENST00000524927 DAAM1Q9Y4D1 1078 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 TRIP11Q15643 1979 aa7.19□□□□□ -1.26
NEDD8-203ENST00000524927 LY6G6EA0A0G2JKS1 128 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 TMX2-CTNND1H3BSU7 103 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 TRIM24O15164 1050 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 SDC3O75056 442 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 PSMD10O75832 226 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 PLEKHA8P1O95397 391 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 AHSGP02765 367 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 SBK3P0C264 359 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 GLRA2P23416 452 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 CSTF2P33240 577 aaKnown RBP eCLIP7.18□□□□□ -1.26
NEDD8-203ENST00000524927 ARL2P36404 184 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 KCNJ5P48544 419 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 PIK3CGP48736 1102 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 PDX1P52945 283 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 NAPAP54920 295 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 CLRN1P58418 232 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 EFEMP1Q12805 493 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 PRPF4BQ13523 1007 aaKnown RBP7.18□□□□□ -1.26
NEDD8-203ENST00000524927 E2F5Q15329 346 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 C14orf28Q4W4Y0 310 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 FKBP15Q5T1M5 1219 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 ZNF529Q6P280 563 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 SEM1Q6ZVN7 128 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 RAB11FIP2Q7L804 512 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 OTUD6AQ7L8S5 288 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 APBB1IPQ7Z5R6 666 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-203ENST00000524927 ZFAND4Q86XD8 727 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 FAM90A1Q86YD7 464 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 KRT78Q8N1N4 520 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 OR10T2Q8NGX3 314 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 SLC35B2Q8TB61 432 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 GJA10Q969M2 543 aa7.18□□□□□ -1.26
NEDD8-203ENST00000524927 FAM227BQ96M60 508 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms