RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 SPAM1P38567 509 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 ARCN1P48444 511 aaKnown RBP8.03□□□□□ -1.12
PUM1-213ENST00000524516 RGS7P49802 495 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 TDGF1P3P51864 188 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 GFERP55789 205 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 CTBSQ01459 385 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 ELP6Q0PNE2 266 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 PRKD1Q15139 912 aaPredicted RBP8.03□□□□□ -1.12
PUM1-213ENST00000524516 ME3Q16798 604 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 IZUMO3Q5VZ72 239 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 ARL6IP4Q66PJ3 421 aaKnown RBP8.03□□□□□ -1.12
PUM1-213ENST00000524516 PWWP2BQ6NUJ5 590 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 C16orf47Q6ZP98 133 aaPredicted RBP8.03□□□□□ -1.12
PUM1-213ENST00000524516 TECPR1Q7Z6L1 1165 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 SCML4Q8N228 414 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 UBA3Q8TBC4 463 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 CLEC4CQ8WTT0 213 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 NR4A3Q92570 626 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 DNAJC19Q96DA6 116 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 RMND5BQ96G75 393 aaPredicted RBP8.03□□□□□ -1.12
PUM1-213ENST00000524516 C9orf72Q96LT7 481 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 TGM7Q96PF1 710 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 GBP5Q96PP8 586 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 PRMT1Q99873 361 aaKnown RBP8.03□□□□□ -1.12
PUM1-213ENST00000524516 TREX2Q9BQ50 279 aaPredicted RBP8.03□□□□□ -1.12
PUM1-213ENST00000524516 SPON2Q9BUD6 331 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 NIF3L1Q9GZT8 377 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 TRNAU1APQ9NX07 287 aaKnown RBP8.03□□□□□ -1.12
PUM1-213ENST00000524516 FAM13BQ9NYF5 915 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 RARRES3Q9UL19 164 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 TCFL5Q9UL49 500 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 TBC1D30Q9Y2I9 924 aa8.03□□□□□ -1.12
PUM1-213ENST00000524516 CACNA1CQ13936 2221 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 A0A0D9SEW6 157 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 PROM1O43490 865 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 CPNE3O75131 537 aaKnown RBP8.02□□□□□ -1.13
PUM1-213ENST00000524516 GADD45BO75293 160 aaPredicted RBP8.02□□□□□ -1.13
PUM1-213ENST00000524516 KLK3P07288 261 aaPredicted RBP8.02□□□□□ -1.13
PUM1-213ENST00000524516 SETSIPP0DME0 302 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 GGCXP38435 758 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 EPHA4P54764 986 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 CDH4P55283 916 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 TUBB3Q13509 450 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 AUHQ13825 339 aaKnown RBP8.02□□□□□ -1.13
PUM1-213ENST00000524516 KCNAB1Q14722 419 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 ZACNQ401N2 412 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 TMEM52BQ4KMG9 183 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 TMCO4Q5TGY1 634 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 HMBOX1Q6NT76 420 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 GDPD4Q6W3E5 623 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 SV2BQ7L1I2 683 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 CAMKMTQ7Z624 323 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 SLC9A9Q8IVB4 645 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 GUF1Q8N442 669 aaKnown RBP8.02□□□□□ -1.13
PUM1-213ENST00000524516 SLC4A11Q8NBS3 891 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 CCDC150Q8NCX0 1101 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 FBXO18Q8NFZ0 1043 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 PLEKHO2Q8TD55 490 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 PARD3BQ8TEW8 1205 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 SH3KBP1Q96B97 665 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 SCARF2Q96GP6 870 aaPredicted RBP8.02□□□□□ -1.13
PUM1-213ENST00000524516 LGR4Q9BXB1 951 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 POLDIP3Q9BY77 421 aaKnown RBP8.02□□□□□ -1.13
PUM1-213ENST00000524516 MIS12Q9H081 205 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 CHST8Q9H2A9 424 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 APOBEC3GQ9HC16 384 aaKnown RBP8.02□□□□□ -1.13
PUM1-213ENST00000524516 WASH6PQ9NQA3 447 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 STMN3Q9NZ72 180 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 SEC14L3Q9UDX4 400 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 STK17AQ9UEE5 414 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 TINAGQ9UJW2 476 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 SUFUQ9UMX1 484 aa8.02□□□□□ -1.13
PUM1-213ENST00000524516 SYNJ2BP-COX16A0A087WUM0 186 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 PEX12O00623 359 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 SLC19A2O60779 497 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 PYGMP11217 842 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 CD19P15391 556 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 ERCC5P28715 1186 aaPredicted RBP8.01□□□□□ -1.13
PUM1-213ENST00000524516 LIG3P49916 1009 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 RAD23BP54727 409 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 POLD3Q15054 466 aaPredicted RBP8.01□□□□□ -1.13
PUM1-213ENST00000524516 TLR1Q15399 786 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 NELFCDQ8IXH7 590 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 CCDC65Q8IXS2 484 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 CBARPQ8N350 705 aaPredicted RBP8.01□□□□□ -1.13
PUM1-213ENST00000524516 SIMC1Q8NDZ2 872 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 NLNQ9BYT8 704 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 EPB41L1Q9H4G0 881 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 COX16Q9P0S2 106 aa8.01□□□□□ -1.13
PUM1-213ENST00000524516 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.01□□□□□ -1.13
PUM1-213ENST00000524516 NCOA6Q14686 2063 aaPredicted RBP8.01□□□□□ -1.13
PUM1-213ENST00000524516 MXRA5Q9NR99 2828 aa8□□□□□ -1.13
PUM1-213ENST00000524516 TOX3O15405 576 aaPredicted RBP8□□□□□ -1.13
PUM1-213ENST00000524516 TGFB1I1O43294 461 aa8□□□□□ -1.13
PUM1-213ENST00000524516 BUB1BO60566 1050 aaPredicted RBP8□□□□□ -1.13
PUM1-213ENST00000524516 FBXO21O94952 628 aa8□□□□□ -1.13
PUM1-213ENST00000524516 SLCO2B1O94956 709 aa8□□□□□ -1.13
PUM1-213ENST00000524516 POP4O95707 220 aaKnown RBP8□□□□□ -1.13
PUM1-213ENST00000524516 TRUB2O95900 331 aaKnown RBP8□□□□□ -1.13
PUM1-213ENST00000524516 IFNA2P01563 188 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms