RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 UNKLQ9H9P5 680 aaKnown RBP4.43□□□□□ -1.7
HDAC2-216ENST00000523628 PNPLA8Q9NP80 782 aa4.43□□□□□ -1.7
HDAC2-216ENST00000523628 LTB4R2Q9NPC1 389 aa4.43□□□□□ -1.7
HDAC2-216ENST00000523628 SERHLQ9NQF3 203 aa4.43□□□□□ -1.7
HDAC2-216ENST00000523628 DNMT3BQ9UBC3 853 aaKnown RBP4.43□□□□□ -1.7
HDAC2-216ENST00000523628 DKK4Q9UBT3 224 aa4.43□□□□□ -1.7
HDAC2-216ENST00000523628 KCNE5Q9UJ90 142 aa4.43□□□□□ -1.7
HDAC2-216ENST00000523628 FBXL5Q9UKA1 691 aa4.43□□□□□ -1.7
HDAC2-216ENST00000523628 CPSF3Q9UKF6 684 aaKnown RBP4.43□□□□□ -1.7
HDAC2-216ENST00000523628 MAN2B2Q9Y2E5 1009 aa4.43□□□□□ -1.7
HDAC2-216ENST00000523628 RIF1Q5UIP0 2472 aaKnown RBP4.43□□□□□ -1.7
HDAC2-216ENST00000523628 PATJQ8NI35 1801 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 GVINP1Q7Z2Y8 2422 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 A0A087WV62 115 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 PRAMEF33A0A0G2JMD5 474 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 GAGE12BA1L429 117 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 WDR27A2RRH5 827 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 FAM234BA2RU67 622 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 GAGE12HA6NDE8 117 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ZNF233A6NK53 670 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 KPNA7A9QM74 516 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 DIRC3C9JPN6 131 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 AGPSO00116 658 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 FOXN3O00409 490 aaPredicted RBP4.42□□□□□ -1.7
HDAC2-216ENST00000523628 IFRD1O00458 451 aaPredicted RBP4.42□□□□□ -1.7
HDAC2-216ENST00000523628 MAPK13O15264 365 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 EXTL3O43909 919 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 PIP5K1CO60331 668 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 PRAMEF10O60809 474 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 CSPG5O95196 566 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 RTN3O95197 1032 aaPredicted RBP4.42□□□□□ -1.7
HDAC2-216ENST00000523628 SPDEFO95238 335 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 NFATC1O95644 943 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 RETP07949 1114 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ZNF37AP17032 561 aaPredicted RBP4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TKTP29401 623 aaKnown RBP4.42□□□□□ -1.7
HDAC2-216ENST00000523628 AVPR1BP47901 424 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 CXCL12P48061 93 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TUBP50607 506 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 LIMK1P53667 647 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 WNT3P56703 355 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 SLC8A3P57103 927 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ZNF844Q08AG5 666 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 MAPK7Q13164 816 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TP53BP2Q13625 1128 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ITPRIPL2Q3MIP1 535 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ARL13BQ3SXY8 428 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 EARS2Q5JPH6 523 aaKnown RBP4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TMEM108Q6UXF1 575 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 KIAA0408Q6ZU52 694 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TPRG1Q6ZUI0 275 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 USP49Q70CQ1 688 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ZNF720Q7Z2F6 126 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 HSCBQ8IWL3 235 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 BRSK2Q8IWQ3 736 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 C12orf56Q8IXR9 622 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 CEP57L1Q8IYX8 460 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 AOPEPQ8N6M6 819 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TMEM105Q8N8V8 129 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 GLIS1Q8NBF1 620 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ZBTB44Q8NCP5 570 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 BPIFB1Q8TDL5 484 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 FAM3CQ92520 227 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 NELL1Q92832 810 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 SNX21Q969T3 373 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 SPSB4Q96A44 273 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 FUBP1Q96AE4 644 aaKnown RBP4.42□□□□□ -1.7
HDAC2-216ENST00000523628 SLITRK1Q96PX8 696 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 FNBP1Q96RU3 617 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 REEP2Q9BRK0 252 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TRIM62Q9BVG3 475 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TTLL2Q9BWV7 592 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ELOVL4Q9GZR5 314 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TMEM74BQ9NUR3 256 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 SYBUQ9NX95 663 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 RBAKQ9NYW8 714 aaPredicted RBP4.42□□□□□ -1.7
HDAC2-216ENST00000523628 TBC1D14Q9P2M4 693 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 ITGB1BP2Q9UKP3 347 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 CDH9Q9ULB4 789 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 PADI4Q9UM07 663 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 CAPN11Q9UMQ6 739 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 YIPF1Q9Y548 306 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 RAD54BQ9Y620 910 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 MYO10Q9HD67 2058 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 VWA8A3KMH1 1905 aa4.42□□□□□ -1.7
HDAC2-216ENST00000523628 WDFY4Q6ZS81 3184 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 SPTBN4Q9H254 2564 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 TCHHQ07283 1943 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 TRAV19A0A0A6YYK7 116 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 FRMD3A2A2Y4 597 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 MYBPHLA2RUH7 354 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 VPS37CA5D8V6 355 aaPredicted RBP4.41□□□□□ -1.7
HDAC2-216ENST00000523628 CLCA1A8K7I4 914 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 VWC2LB2RUY7 222 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 E9PMD0 336 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 PIRO00625 290 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 CYB561D2O14569 222 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 IKBKBO14920 756 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 AREL1O15033 823 aa4.41□□□□□ -1.7
HDAC2-216ENST00000523628 CCL16O15467 120 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms