RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ST14Q9Y5Y6 855 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 MYO18BQ8IUG5 2567 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 ASH1LQ9NR48 2969 aaKnown RBP15.41■□□□□ 0.06
MRPS28-209ENST00000522987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.41■□□□□ 0.06
MRPS28-209ENST00000522987 CFAP69A5D8W1 941 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 EIF3CLB5ME19 914 aaKnown RBP15.41■□□□□ 0.06
MRPS28-209ENST00000522987 TNFRSF10CO14798 259 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 MAP3K6O95382 1288 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 PEX11BO96011 259 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 FAM87AP0C7U9 286 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 LIPCP11150 499 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 GJC1P36383 396 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 ARL4AP40617 200 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 ILF3Q12906 894 aaKnown RBP eCLIP15.41■□□□□ 0.064e-6■■□□□ 12
MRPS28-209ENST00000522987 MMRN1Q13201 1228 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 CCDC183Q5T5S1 534 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 TMCO3Q6UWJ1 677 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 PIM3Q86V86 326 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 ATPAF2Q8N5M1 289 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 KIAA1524Q8TCG1 905 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 GPBAR1Q8TDU6 330 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 LRRN4Q8WUT4 740 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 SGF29Q96ES7 293 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 DTD2Q96FN9 168 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 GBP4Q96PP9 640 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 CSPG4P5Q96PW8 444 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 NUDCD1Q96RS6 583 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 EIF3CQ99613 913 aaKnown RBP15.41■□□□□ 0.06
MRPS28-209ENST00000522987 CMKLR1Q99788 373 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 GSDMCQ9BYG8 508 aa15.41■□□□□ 0.06
MRPS28-209ENST00000522987 CAPN8A6NHC0 703 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 NVLO15381 856 aaKnown RBP15.4■□□□□ 0.06
MRPS28-209ENST00000522987 HTRA2O43464 458 aaPredicted RBP15.4■□□□□ 0.06
MRPS28-209ENST00000522987 NUDT21O43809 227 aaKnown RBP15.4■□□□□ 0.06
MRPS28-209ENST00000522987 MAFKO60675 156 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 PDHA1P08559 390 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 HOXC4P09017 264 aaPredicted RBP15.4■□□□□ 0.06
MRPS28-209ENST00000522987 RARAP10276 462 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 CR2P20023 1033 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 SSR1P43307 286 aaKnown RBP15.4■□□□□ 0.06
MRPS28-209ENST00000522987 MMP13P45452 471 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 CDK3Q00526 305 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 CTBSQ01459 385 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 ITKQ08881 620 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 FAM182AQ5T1J6 154 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 ZNF574Q6ZN55 896 aaPredicted RBP15.4■□□□□ 0.06
MRPS28-209ENST00000522987 POLNQ7Z5Q5 900 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 CPNE8Q86YQ8 564 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 CCDC74BQ96LY2 380 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 ZNF599Q96NL3 588 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 NAP1L5Q96NT1 182 aaPredicted RBP15.4■□□□□ 0.06
MRPS28-209ENST00000522987 TEX101Q9BY14 249 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 FRMD8Q9BZ67 464 aaPredicted RBP15.4■□□□□ 0.06
MRPS28-209ENST00000522987 ZMYND15Q9H091 742 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 TMEM9Q9P0T7 183 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 SCINQ9Y6U3 715 aa15.4■□□□□ 0.06
MRPS28-209ENST00000522987 PDE2AO00408 941 aaPredicted RBP15.39■□□□□ 0.05
MRPS28-209ENST00000522987 SOCS5O75159 536 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 CPNE6O95741 557 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 CYP2A6P11509 494 aaPredicted RBP15.39■□□□□ 0.05
MRPS28-209ENST00000522987 PNLIPP16233 465 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 ANP32AP39687 249 aaKnown RBP15.39■□□□□ 0.05
MRPS28-209ENST00000522987 ADCY8P40145 1251 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 ACTR1BP42025 376 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 GPR1P46091 355 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 HCAR3P49019 387 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 ACTR1AP61163 376 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 DPYSL2Q16555 572 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 TSR1Q2NL82 804 aaKnown RBP15.39■□□□□ 0.05
MRPS28-209ENST00000522987 TDRD12Q587J7 1177 aaKnown RBP15.39■□□□□ 0.05
MRPS28-209ENST00000522987 PPP1R2P3Q6NXS1 205 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 LZTR1Q8N653 840 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 SCAMP4Q969E2 229 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 RNF31Q96EP0 1072 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 AGAP2Q99490 1192 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 MGME1Q9BQP7 344 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 FAM117AQ9C073 453 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 PCDH18Q9HCL0 1135 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 SEPT10Q9P0V9 454 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 TMEM63CQ9P1W3 806 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 PHTF1Q9UMS5 762 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 PRKAB1Q9Y478 270 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 TTLL3Q9Y4R7 772 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 PCDHGA4Q9Y5G9 962 aa15.39■□□□□ 0.05
MRPS28-209ENST00000522987 HEMK1Q9Y5R4 338 aaPredicted RBP15.39■□□□□ 0.05
MRPS28-209ENST00000522987 IGHV5-10-1A0A0J9YXX1 117 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 CYSRT1A8MQ03 144 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 PPM1DO15297 605 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 INPP4BO15327 924 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 PGLSO95336 258 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 CD48P09326 243 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 GZMAP12544 262 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 KRT81Q14533 505 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 FILIP1LQ4L180 1135 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 SNAP47Q5SQN1 464 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 ARMC12Q5T9G4 340 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 MARC1Q5VT66 337 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 LRRC66Q68CR7 880 aa15.38■□□□□ 0.05
MRPS28-209ENST00000522987 PSTKQ8IV42 348 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms