RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 NMBRP28336 390 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 SPINT3P49223 89 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 ACOX1Q15067 660 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 SPANXN3Q5MJ09 141 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 STEAP4Q687X5 459 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 CYP2U1Q7Z449 544 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 HSD11B1LQ7Z5J1 315 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 TRIM69Q86WT6 500 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 HORMAD1Q86X24 394 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 MAML2Q8IZL2 1156 aaPredicted RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 OR13C4Q8NGS5 318 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 MFSD3Q96ES6 412 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 SPACA7Q96KW9 195 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 C9orf72Q96LT7 481 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 COQ10AQ96MF6 247 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 ZNF778Q96MU6 729 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 FAM169AQ9Y6X4 670 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 PLXNA2O75051 1894 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 BUD23O43709 281 aaKnown RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 LZTS3O60299 673 aaPredicted RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 GPR37L1O60883 481 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 RNGTTO60942 597 aaKnown RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 TM7SF2O76062 418 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 AGERQ15109 404 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 UNC5AQ6ZN44 842 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 TRMT10CQ7L0Y3 403 aaKnown RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 TECPR1Q7Z6L1 1165 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 WDR5BQ86VZ2 330 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 NRSN1Q8IZ57 195 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 OR13J1Q8NGT2 312 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 RLN3Q8WXF3 142 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 CAVIN3Q969G5 261 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 ZNF669Q96BR6 464 aaPredicted RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 DNAJC1Q96KC8 554 aaKnown RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 CDC42EP4Q9H3Q1 356 aaKnown RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 C11orf16Q9NQ32 467 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 NFKBIL1Q9UBC1 381 aaPredicted RBP25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 CEP192Q8TEP8 1941 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 PRR33A8MZF0 331 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 H7C0S8 307 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 WNT9AO14904 365 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 SPAG6O75602 509 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 RPP40O75818 363 aaKnown RBP25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 PMS2P54278 862 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 CSTF1Q05048 431 aaKnown RBP25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 CRYMQ14894 314 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 TMEM259Q4ZIN3 620 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 TMEM31Q5JXX7 168 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 KIAA0930Q6ICG6 404 aaPredicted RBP25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 ESRP1Q6NXG1 681 aaKnown RBP25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 TSSK4Q6SA08 328 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 ASB12Q8WXK4 309 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 CFAP36Q96G28 342 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 CDKN2AIPNLQ96HQ2 116 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 PLEKHG4BQ96PX9 1271 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 C1QTNF2Q9BXJ5 285 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 FAM126AQ9BYI3 521 aaPredicted RBP25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 PCED1AQ9H1Q7 454 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 BPIFA1Q9NP55 256 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 SLC2A6Q9UGQ3 507 aa25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 ZFR2Q9UPR6 939 aaKnown RBP25.62■■□□□ 1.69
NKX2-1-204ENST00000522719 ZCWPW2A0A1B0GU75 182 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 A0A1W2PQU0 124 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 CCDC78A2IDD5 438 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 IGLON5A6NGN9 336 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 FAM47DPA6NHR8 397 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 C10orf142B7Z368 130 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 BPIP17213 487 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 GM2AP17900 193 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 DCDC1P59894 354 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 FRG1Q14331 258 aaKnown RBP25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 PTPRCAPQ14761 206 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 CES3Q6UWW8 571 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 Q6ZVL8 140 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 ZNF765Q7L2R6 523 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 LONP2Q86WA8 852 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 GSDMBQ8TAX9 411 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 DTX3LQ8TDB6 740 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 DTD2Q96FN9 168 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 FCRL3Q96P31 734 aaPredicted RBP25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 LRRC4CQ9HCJ2 640 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 NINJ2Q9NZG7 142 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 APPL1Q9UKG1 709 aa25.61■■□□□ 1.69
NKX2-1-204ENST00000522719 PRR23AA6NEV1 266 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 RECQL5O94762 991 aaPredicted RBP25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 SPAM1P38567 509 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 ETV3P41162 512 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 CCR5P51681 352 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 NUBP1P53384 320 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 DMWDQ09019 674 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 SGCGQ13326 291 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 KYNUQ16719 465 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 SEL1L3Q68CR1 1132 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 SLC36A4Q6YBV0 504 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 NLRP8Q86W28 1048 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 TRIM56Q9BRZ2 755 aaKnown RBP25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 SEMA4AQ9H3S1 761 aa25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.6■■□□□ 1.69
NKX2-1-204ENST00000522719 UQCRHLA0A096LP55 91 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms