RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SPATA31D4Q6ZUB0 917 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 C11orf57Q6ZUT1 292 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 TOM1L2Q6ZVM7 507 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 XYLT1Q86Y38 959 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 DDIASQ8IXT1 998 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 AMER2Q8N7J2 671 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.06□□□□□ -1.76
SKP1-209ENST00000522552 SLC4A11Q8NBS3 891 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 MNS1Q8NEH6 495 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 EXOC6Q8TAG9 804 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 METTL21AQ8WXB1 218 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ARHGAP45Q92619 1136 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 LPPQ93052 612 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 EXT2Q93063 718 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SLAMF9Q96A28 289 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 WDYHV1Q96HA8 205 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 WRNIP1Q96S55 665 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ELOVL1Q9BW60 279 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SCNM1Q9BWG6 230 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 MMP27Q9H306 513 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 FZD8Q9H461 694 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 NOL11Q9H8H0 719 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 GORASP2Q9H8Y8 452 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 AKIRIN1Q9H9L7 192 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 PIH1D3Q9NQM4 214 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 SPG21Q9NZD8 308 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 CTNNAL1Q9UBT7 734 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 NKX1-2Q9UD57 310 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 SERTAD3Q9UJW9 196 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 CROTQ9UKG9 612 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SLC8A2Q9UPR5 921 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 NPHP3Q7Z494 1330 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 FAM237AA0A1B0GTK4 181 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 CCDC195A0A1B0GUA6 201 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 A0A1B0GWJ7 208 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 YDJCA8MPS7 323 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 TTI1O43156 1089 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 MED24O75448 989 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 PAHP00439 452 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ENO1P06733 434 aaKnown RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 RHOP08100 348 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 C8orf89P0DMQ9 161 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 AREGP15514 252 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 IGFBP2P18065 325 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 STIP1P31948 543 aaKnown RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 CD96P40200 585 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 PTGER3P43115 390 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 CD97P48960 835 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ADCY7P51828 1080 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 YWHAZP63104 245 aaKnown RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 MC2RQ01718 297 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ZNF844Q08AG5 666 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ACSM1Q08AH1 577 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 GPR162Q16538 588 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 GAGE13Q4V321 117 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 FASTKD1Q53R41 847 aaKnown RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 TAF1BQ53T94 588 aaPredicted RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 ZNF789Q5FWF6 425 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 RARS2Q5T160 578 aaKnown RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 SEPT14Q6ZU15 432 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 SYVN1Q86TM6 617 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 SLC51AQ86UW1 340 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ADIPOR2Q86V24 386 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 VASH2Q86V25 355 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ZNF410Q86VK4 478 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 IZUMO1Q8IYV9 350 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 BATF2Q8N1L9 274 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 GHDCQ8N2G8 530 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ZCCHC7Q8N3Z6 543 aaKnown RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 CCNYQ8ND76 341 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 FLAD1Q8NFF5 587 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 FAM110DQ8TAY7 271 aaPredicted RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 GANCQ8TET4 914 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 OSCP1Q8WVF1 389 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 GLMPQ8WWB7 406 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ST8SIA2Q92186 375 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ST6GALNAC6Q969X2 333 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 AJUBAQ96IF1 538 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 ZNF560Q96MR9 790 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 CLIC6Q96NY7 704 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 RTN4RQ9BZR6 473 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 PLEKHA4Q9H4M7 779 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 CDCP1Q9H5V8 836 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 SMPD3Q9NY59 655 aaPredicted RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 UTP6Q9NYH9 597 aaKnown RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 UPB1Q9UBR1 384 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 FBXO40Q9UH90 709 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 IL17BQ9UHF5 180 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 SLC25A13Q9UJS0 675 aa4.05□□□□□ -1.76
SKP1-209ENST00000522552 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.05□□□□□ -1.76
SKP1-209ENST00000522552 TTC41PQ6P2S7 1318 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 A0A1W2PPM1 405 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CFAP73A6NFT4 308 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 C5orf52A6NGY3 159 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CGB1A6NKQ9 187 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 CYP26A1O43174 497 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 SELENOFO60613 162 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 MTX2O75431 263 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 STC2O76061 302 aa4.04□□□□□ -1.76
SKP1-209ENST00000522552 ZWINTO95229 277 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms