RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CCNB1P14635 433 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 RBMS1P29558 406 aaKnown RBP20.67■□□□□ 0.9
SDCBP-209ENST00000522243 MAN1A1P33908 653 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 GNPDA1P46926 289 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 POLD2P49005 469 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 EPHB1P54762 984 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 TLE3Q04726 772 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 NIPAL4Q0D2K0 466 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 COL9A2Q14055 689 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-209ENST00000522243 OGFOD3Q6PK18 319 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 TECPR1Q7Z6L1 1165 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 B3GNT8Q7Z7M8 397 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 NDUFAF2Q8N183 169 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 CCNYQ8ND76 341 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 ARRDC2Q8TBH0 407 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 GRAMD1AQ96CP6 724 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 PRR11Q96HE9 360 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-209ENST00000522243 HIC2Q96JB3 615 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 TSGA13Q96PP4 275 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 GFM1Q96RP9 751 aaKnown RBP20.67■□□□□ 0.9
SDCBP-209ENST00000522243 FRMD8Q9BZ67 464 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-209ENST00000522243 LRRN3Q9H3W5 708 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 KCTD5Q9NXV2 234 aa20.67■□□□□ 0.9
SDCBP-209ENST00000522243 DSPP15924 2871 aaKnown RBP20.66■□□□□ 0.9
SDCBP-209ENST00000522243 CELSR3Q9NYQ7 3312 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 A0A0J9YYE9 177 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 LRRD1A4D1F6 860 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 MFAP3LO75121 409 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 TRBC1P01850 177 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 TPM1P09493 284 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 GPR1P46091 355 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 ERVPABLB-1P60509 514 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 ALG1LQ6GMV1 187 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 DOK6Q6PKX4 331 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 CCDC13Q8IYE1 715 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 OR6C4Q8NGE1 309 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 CCDC42Q96M95 316 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 SLC46A1Q96NT5 459 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 FCRL3Q96P31 734 aaPredicted RBP20.66■□□□□ 0.9
SDCBP-209ENST00000522243 RNF157Q96PX1 679 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 FOXP3Q9BZS1 431 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 ABCG8Q9H221 673 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 NHEJ1Q9H9Q4 299 aaPredicted RBP20.66■□□□□ 0.9
SDCBP-209ENST00000522243 EPB41L5Q9HCM4 733 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 THSD1Q9NS62 852 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 SPATS2LQ9NUQ6 558 aaKnown RBP20.66■□□□□ 0.9
SDCBP-209ENST00000522243 DTLQ9NZJ0 730 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 LCMT1Q9UIC8 334 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 ATXN7L1Q9ULK2 861 aaPredicted RBP20.66■□□□□ 0.9
SDCBP-209ENST00000522243 SUFUQ9UMX1 484 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 RNF215Q9Y6U7 377 aa20.66■□□□□ 0.9
SDCBP-209ENST00000522243 ARHGEF17Q96PE2 2063 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-209ENST00000522243 CCDC187A0A096LP49 1063 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 AGRPO00253 132 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 KRT10P13645 584 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 GLB1P16278 677 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 MX2P20592 715 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 AK4P27144 223 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-209ENST00000522243 PTSQ03393 145 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 C14orf28Q4W4Y0 310 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 NRROSQ86YC3 692 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 LPCAT1Q8NF37 534 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 WDR36Q8NI36 951 aaKnown RBP20.65■□□□□ 0.9
SDCBP-209ENST00000522243 KCNE4Q8WWG9 221 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 SCAMP4Q969E2 229 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 AP2M1Q96CW1 435 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 HDAC11Q96DB2 347 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 TDRD1Q9BXT4 1180 aaKnown RBP20.65■□□□□ 0.9
SDCBP-209ENST00000522243 LRIT1Q9P2V4 623 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 ZFYVE26Q68DK2 2539 aa20.65■□□□□ 0.9
SDCBP-209ENST00000522243 D6RAR5 112 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 KCNK1O00180 336 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 TNFSF15O95150 251 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 CLDN7O95471 211 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 PRLP01236 227 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 JCHAINP01591 159 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 TNNT1P13805 278 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 CES1P23141 567 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 MAZP56270 477 aaKnown RBP20.64■□□□□ 0.89
SDCBP-209ENST00000522243 CXADRP78310 365 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 HLTFQ14527 1009 aaKnown RBP eCLIP20.64■□□□□ 0.89
SDCBP-209ENST00000522243 CERCAMQ5T4B2 595 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 TRIM74Q86UV6 250 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 CCNJLQ8IV13 435 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 PLD5Q8N7P1 536 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 GPBAR1Q8TDU6 330 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 FATE1Q969F0 183 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.89
SDCBP-209ENST00000522243 AGAP2Q99490 1192 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 GSDMCQ9BYG8 508 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 PCDH9Q9HC56 1237 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 AMACRQ9UHK6 382 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 TMEM98Q9Y2Y6 226 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 PCDHGA8Q9Y5G5 932 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 HEY1Q9Y5J3 304 aa20.64■□□□□ 0.89
SDCBP-209ENST00000522243 KLK10O43240 276 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 SOD1P00441 154 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 ZNF30P17039 623 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 INHBCP55103 352 aa20.63■□□□□ 0.89
SDCBP-209ENST00000522243 DPTQ07507 201 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms