RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 ADAMTS9Q9P2N4 1935 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ASCC3Q8N3C0 2202 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 A0A1B0GVT2 93 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 A0A1W2PPC4 97 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 DCDC2BA2VCK2 349 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 VGLL3A8MV65 326 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ARHGAP33O14559 1287 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 TP73O15350 636 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 INSIG1O15503 277 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 SPINT1O43278 529 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 LATO43561 262 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 KIF1CO43896 1103 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 PIGNO95427 931 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 TROVE2P10155 538 aaKnown RBP eCLIP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ADRB3P13945 408 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 SDHBP21912 280 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 MAT2AP31153 395 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 SERPINB6P35237 376 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ABL2P42684 1182 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 RGRP47804 291 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 GRIA4P48058 902 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 CSNK1EP49674 416 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 AFF3P51826 1226 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 SNRPD1P62314 119 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 CBLBQ13191 982 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 CYTH1Q15438 398 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 SEPT7Q16181 437 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 PDK4Q16654 411 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 MYLK3Q32MK0 819 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 UAP1L1Q3KQV9 507 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ATP13A4Q4VNC1 1196 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 INO80DQ53TQ3 878 aaPredicted RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 LRRC73Q5JTD7 316 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 TMCO4Q5TGY1 634 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 NCBP2-AS2Q69YL0 99 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 SPOCD1Q6ZMY3 1216 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ERN2Q76MJ5 926 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 DGLUCYQ7Z3D6 616 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 TRABD2AQ86V40 505 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 TRIM69Q86WT6 500 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 VSIG1Q86XK7 387 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 TRIM42Q8IWZ5 723 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 PPIL6Q8IXY8 311 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 MINDY1Q8N5J2 469 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ATPAF2Q8N5M1 289 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ANKRD42Q8N9B4 389 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 LRRC8CQ8TDW0 803 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 FAF2Q96CS3 445 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 TMEM237Q96Q45 408 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 MYOCQ99972 504 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ZNF670Q9BS34 389 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 CALN1Q9BXU9 219 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 HDAC8Q9BY41 377 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 PITPNM3Q9BZ71 974 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 EBF2Q9HAK2 575 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 NOD2Q9HC29 1040 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 FGFR1OP2Q9NVK5 253 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 CTNNAL1Q9UBT7 734 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 IPO11Q9UI26 975 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 MCM8Q9UJA3 840 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 ITM2BQ9Y287 266 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 FNDC3AQ9Y2H6 1198 aaKnown RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 TP53BP1Q12888 1972 aaPredicted RBP6.85□□□□□ -1.31
SPIDR-218ENST00000522222 NCOR2Q9Y618 2525 aa6.85□□□□□ -1.31
SPIDR-218ENST00000522222 LAMA1P25391 3075 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
SPIDR-218ENST00000522222 hCG_1818297A0A087WSY0 165 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TBC1D3DA0A087WVF3 549 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TBC1D3IA0A087WXS9 549 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TBC1D3EA0A087X179 549 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TBC1D3KA0A087X1G2 549 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 IQANK1A0A1B0GTG1 560 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 A0A1W2PQU0 124 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 LRRD1A4D1F6 860 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 CFAP69A5D8W1 941 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TBC1D3FA6NER0 549 aaPredicted RBP6.84□□□□□ -1.31
SPIDR-218ENST00000522222 C16orf96A6NNT2 1141 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TBC1D3LB9A6J9 549 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TM4SF5O14894 197 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 WNT9AO14904 365 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 MUSKO15146 869 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 RNGTTO60942 597 aaKnown RBP6.84□□□□□ -1.31
SPIDR-218ENST00000522222 GJB3O75712 270 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 UBOX5O94941 541 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 UNC5CO95185 931 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 MAP3K6O95382 1288 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 ASMTLO95671 621 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 POP4O95707 220 aaKnown RBP6.84□□□□□ -1.31
SPIDR-218ENST00000522222 PEX11BO96011 259 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 WNT1P04628 370 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 SYPP08247 313 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 GSTA2P09210 222 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 TBC1D3HP0C7X1 549 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 KRT15P19012 456 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 IL4RP24394 825 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 STIP1P31948 543 aaKnown RBP6.84□□□□□ -1.31
SPIDR-218ENST00000522222 ATXN3P54252 364 aaPredicted RBP6.84□□□□□ -1.31
SPIDR-218ENST00000522222 NCALDP61601 193 aa6.84□□□□□ -1.31
SPIDR-218ENST00000522222 RACK1P63244 317 aaKnown RBP6.84□□□□□ -1.31
SPIDR-218ENST00000522222 IL10RBQ08334 325 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms