RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 NUAK2Q9H093 628 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 APOBEC3GQ9HC16 384 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 GALNT8Q9NY28 637 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 KLQ9UEF7 1012 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 TRIM38O00635 465 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 LIN52Q52LA3 116 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 PIWIL4Q7Z3Z4 852 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 COLGALT2Q8IYK4 626 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 ARL14EPQ8N8R7 260 aaPredicted RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 MRPL57Q9BQC6 102 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 SOHLH2Q9NX45 425 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 DUSP12Q9UNI6 340 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 ERVW-1Q9UQF0 538 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 CHKBQ9Y259 395 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 ALOX15BO15296 676 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 RPL17P18621 184 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 GJA8P48165 433 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 CCT3P49368 545 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 FOLH1Q04609 750 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 TXNDC11Q6PKC3 985 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 PTCD2Q8WV60 388 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 SEPHS2Q99611 448 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 HDHD2Q9H0R4 259 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 UNC93B1Q9H1C4 597 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 KCNE2Q9Y6J6 123 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 PTPRJQ12913 1337 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 EFCAB10A6NFE3 127 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 GCATO75600 419 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 SEC24AO95486 1093 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 UGT2B4P06133 528 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 EPHX1P07099 455 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 LBPP18428 481 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 TPSB2P20231 275 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 ABCG1P45844 678 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 NAGLUP54802 743 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 AP1S1P61966 158 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 TPSAB1Q15661 275 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 CDK20Q8IZL9 346 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 ADCY4Q8NFM4 1077 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 RP9Q8TA86 221 aaKnown RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 SUSD3Q96L08 255 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 KCTD15Q96SI1 283 aaPredicted RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 WRAP73Q9P2S5 460 aaPredicted RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 TLL2Q9Y6L7 1015 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 CCDC154A6NI56 674 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 EDF1O60869 148 aaKnown RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 FESP07332 822 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 CENPAP49450 140 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 NDST2P52849 883 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 TNK2Q07912 1038 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 TRAP1Q12931 704 aaKnown RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 SLC51AQ86UW1 340 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 PLD5Q8N7P1 536 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 C12orf50Q8NA57 414 aaPredicted RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 TFAP2BQ92481 460 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 FAIM2Q9BWQ8 316 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 SEMA4BQ9NPR2 832 aaPredicted RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 CREBZFQ9NS37 354 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 PIPSLA2A3N6 862 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 BCLAF3A2AJT9 711 aaKnown RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 LRIG2O94898 1065 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 DPYSQ14117 519 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 CERS6Q6ZMG9 384 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 TMEM132CQ8N3T6 1108 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 RNF145Q96MT1 663 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 GMEB1Q9Y692 573 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 NTSP30990 170 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 PBX3P40426 434 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 ERVK-21P61565 698 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 BNIP2Q12982 314 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 LPIN1Q14693 890 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 RFWD3Q6PCD5 774 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 ULK2Q8IYT8 1036 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 RDH11Q8TC12 318 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 UBASH3BQ8TF42 649 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 BTN2A2Q8WVV5 523 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 NDRG1Q92597 394 aaKnown RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 NKD2Q969F2 451 aaPredicted RBP16.19■□□□□ 0.18
USP42-207ENST00000521713 RAI2Q9Y5P3 530 aa16.19■□□□□ 0.18
USP42-207ENST00000521713 FAM220BPB1ANY3 271 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 HS6ST1O60243 411 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 SHBGP04278 402 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 LMO2P25791 158 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 IL12AP29459 219 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 TUBA4AP68366 448 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 BNIP1Q12981 228 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 SPIDRQ14159 915 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 TCEA2Q15560 299 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 KHDRBS2Q5VWX1 349 aaKnown RBP16.18■□□□□ 0.18
USP42-207ENST00000521713 PAGE2Q7Z2X7 111 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 PDPRQ8NCN5 879 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 VWA7Q9Y334 891 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 AP4B1Q9Y6B7 739 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 PRMT5O14744 637 aaPredicted RBP16.18■□□□□ 0.18
USP42-207ENST00000521713 MGRN1O60291 552 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 POP4O95707 220 aaKnown RBP16.18■□□□□ 0.18
USP42-207ENST00000521713 ITGA2BP08514 1039 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 COX4I1P13073 169 aa16.18■□□□□ 0.18
USP42-207ENST00000521713 RPL3P39023 403 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms