RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 TROVE2P10155 538 aaKnown RBP eCLIP22.12■■□□□ 1.132e-6■■□□□ 12.5
PTP4A3-204ENST00000521578 SCNN1BP51168 640 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 ELAVL3Q14576 367 aaKnown RBP22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 ANKRD20A4Q4UJ75 823 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 FBXW10Q5XX13 1052 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 RASSF3Q86WH2 238 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 DNAAF3Q8N9W5 541 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 GRIN3AQ8TCU5 1115 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 HHIPQ96QV1 700 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 FAM129BQ96TA1 746 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 CPNE1Q99829 537 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 MGME1Q9BQP7 344 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 IER2Q9BTL4 223 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 TSSK1BQ9BXA7 367 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 SLC13A1Q9BZW2 595 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 IL22Q9GZX6 179 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 SLC6A17Q9H1V8 727 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 ZDHHC6Q9H6R6 413 aa22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 AAR2Q9Y312 384 aaKnown RBP22.12■■□□□ 1.13
PTP4A3-204ENST00000521578 CFAP73A6NFT4 308 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 GP5P40197 560 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 CXCL12P48061 93 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 DGKEP52429 567 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 COPAP53621 1224 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 NCALDP61601 193 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 NSUN2Q08J23 767 aaKnown RBP eCLIP22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 SETDB1Q15047 1291 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 MYLK3Q32MK0 819 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 GRTP1Q5TC63 336 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 RAB3IL1Q8TBN0 382 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 OR8D1Q8WZ84 308 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 POLR1EQ9GZS1 481 aaKnown RBP22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 MKRN2Q9H000 416 aaKnown RBP22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 POLMQ9NP87 494 aaPredicted RBP22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 PCMTD2Q9NV79 361 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 SIRPGQ9P1W8 387 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 ZFATQ9P243 1243 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 BIRC5O15392 142 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 BGNP21810 368 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 SKIV2L2P42285 1042 aaKnown RBP22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 CDH17Q12864 832 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 DBN1Q16643 649 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 SPDYAQ5MJ70 313 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 CES3Q6UWW8 571 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 KYAT3Q6YP21 454 aaKnown RBP22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 MMAAQ8IVH4 418 aaKnown RBP22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 PLPP6Q8IY26 295 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 OR2T3Q8NH03 318 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 SEMA3CQ99985 751 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 HEPHQ9BQS7 1158 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 GLOD4Q9HC38 313 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 SCUBE2Q9NQ36 999 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 SLC17A6Q9P2U8 582 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 SOX13Q9UN79 622 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 CHKBQ9Y259 395 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 PSAT1Q9Y617 370 aa22.11■■□□□ 1.13
PTP4A3-204ENST00000521578 ANXA9O76027 345 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 POP4O95707 220 aaKnown RBP22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 ALDOAP04075 364 aaKnown RBP22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 CTSLP07711 333 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 ITGA2BP08514 1039 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 ERVK-10P10266 1014 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 CR2P20023 1033 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 DSC2Q02487 901 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 CERCAMQ5T4B2 595 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 TMPRSS6Q8IU80 811 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 ARMC2Q8NEN0 867 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 TSTD1Q8NFU3 115 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 HMGB4Q8WW32 186 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 ZNF669Q96BR6 464 aaPredicted RBP22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 THOC1Q96FV9 657 aaKnown RBP22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 NOD2Q9HC29 1040 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 IL36AQ9UHA7 158 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 SARDHQ9UL12 918 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 WASF2Q9Y6W5 498 aa22.1■■□□□ 1.13
PTP4A3-204ENST00000521578 AVPR2P30518 371 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 CCR3P51677 355 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 POM121L1PQ3SYA9 428 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 ARSIQ5FYB1 569 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 ANO7Q6IWH7 933 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 ISL2Q96A47 359 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 NSMCE3Q96MG7 304 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 LRRC37BQ96QE4 947 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 NUDCD1Q96RS6 583 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 TRIM55Q9BYV6 548 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 RSPH9Q9H1X1 276 aaPredicted RBP22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 NPHS2Q9NP85 383 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 GPR37L1O60883 481 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 RNASEH1O60930 286 aaKnown RBP22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 LEFTY1O75610 366 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 NEFHP12036 1026 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 GABRG2P18507 467 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 NDUFV2P19404 249 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 CSNK1DP48730 415 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 RAD51Q06609 339 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 ATG16L1Q676U5 607 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 DSG4Q86SJ6 1040 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 PGBD3Q8N328 593 aa22.09■■□□□ 1.13
PTP4A3-204ENST00000521578 DTWD2Q8NBA8 298 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms