RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TRPV2Q9Y5S1 764 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 TNFRSF18Q9Y5U5 241 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZCCHC6Q5VYS8 1495 aaKnown RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 ASTN2O75129 1339 aaPredicted RBP3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF644Q9H582 1327 aaPredicted RBP3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 TCRBV21S2A2A0A5A6 115 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 DPPA5A6NC42 116 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 CHL1O00533 1208 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ATP2A1O14983 1001 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 MDM4O15151 490 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ATP2C2O75185 946 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 CREG1O75629 220 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 RNF8O76064 485 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 TOMM70O94826 608 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 EPN2O95208 641 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ICAM1P05362 532 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 FYNP06241 537 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 QDPRP09417 244 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 KRT10P13645 584 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 IFNAR1P17181 557 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 CHRNB2P17787 502 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ANXA7P20073 488 aaKnown RBP3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 TNFRSF1BP20333 461 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 MAOAP21397 527 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 CHATP28329 748 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 AVPR1AP37288 418 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 THPOP40225 353 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 RASSF2P50749 326 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 STAT2P52630 851 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 TERF1P54274 439 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ACSM2AQ08AH3 577 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 MTX1Q13505 466 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 IL11RAQ14626 422 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF284Q2VY69 593 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 SUPT20HL1Q3ZLR7 823 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 TCP11X2Q5H9J9 407 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLC10A5Q5PT55 438 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 C6orf10Q5SRN2 563 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ACSM2BQ68CK6 577 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 NCAPH2Q6IBW4 605 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 HEPHL1Q6MZM0 1159 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 PRIMA1Q86XR5 153 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 NRROSQ86YC3 692 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 SFTPA2Q8IWL1 248 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 DPP10Q8N608 796 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 AVL9Q8NBF6 648 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 NTN5Q8WTR8 489 aaPredicted RBP3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ERGIC1Q969X5 290 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 RHBDF1Q96CC6 855 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ARSGQ96EG1 525 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF333Q96JL9 665 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 CNDP2Q96KP4 475 aaKnown RBP3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 HRH4Q9H3N8 390 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 CLK4Q9HAZ1 481 aaKnown RBP3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 BPIFA1Q9NP55 256 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 CYSLTR2Q9NS75 346 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 DNAJB4Q9UDY4 337 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 ACSL5Q9ULC5 683 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 COX11Q9Y6N1 276 aa3.5□□□□□ -1.85
HMGN1P28-201ENST00000521340 hCG_1809904A0A1W2PP81 198 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 A0A1W2PPE2 198 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 A0A1W2PR64 198 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 FEZF1A0PJY2 475 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 TYW5A2RUC4 315 aaKnown RBP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 GAGE12JA6NER3 117 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 OGG1O15527 345 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLC7A4O43246 635 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 KLKB1P03952 638 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 APOA4P06727 396 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 MMP3P08254 477 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 MPGP29372 298 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 HOXC8P31273 242 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 RFC1P35251 1148 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 METAP2P50579 478 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 GPR143P51810 404 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 MRPS34P82930 218 aaKnown RBP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 SORDQ00796 357 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 ECT2LQ008S8 904 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 CALD1Q05682 793 aaKnown RBP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 TRAF1Q13077 416 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 HNRNPA0Q13151 305 aaKnown RBP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 ALCAMQ13740 583 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 SNTB1Q13884 538 aaKnown RBP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 NAB2Q15742 525 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 EFNB3Q15768 340 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 C15orf59Q2T9L4 293 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 ATP13A5Q4VNC0 1218 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 Q5PR19 223 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 C10orf25Q5T742 122 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 NUGGCQ68CJ6 796 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 CES5AQ6NT32 575 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 DCLRE1AQ6PJP8 1040 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 SUSD1Q6UWL2 747 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLC16A12Q6ZSM3 486 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLFN11Q7Z7L1 901 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 GALNT13Q8IUC8 556 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 MB21D2Q8IYB1 491 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 SCYL3Q8IZE3 742 aa3.49□□□□□ -1.85
HMGN1P28-201ENST00000521340 GUF1Q8N442 669 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms