RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-222	ENST00000520948	GM2A	P17900	193 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	RPL22	P35268	128 aa	Known RBP	18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	HNF1B	P35680	557 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	NUDT1	P36639	197 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	C21orf59	P57076	290 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	SEMG2	Q02383	582 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	CDKN3	Q16667	212 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	SOWAHC	Q53LP3	525 aa	Predicted RBP	18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	RANBP10	Q6VN20	620 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	ARHGEF18	Q6ZSZ5	1173 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	GATAD2A	Q86YP4	633 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	GALNT15	Q8N3T1	639 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	CAPZA3	Q96KX2	299 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	PPP1R2P1	Q96PQ5	205 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	ADGRE3	Q9BY15	652 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	SLC17A9	Q9BYT1	436 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	FTSJ1	Q9UET6	329 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	NEU2	Q9Y3R4	380 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	APC2	O95996	2303 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	NPIPB15	A6NHN6	443 aa	Predicted RBP	18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	NEMP1	O14524	444 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	IFNB1	P01574	187 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	ALPI	P09923	528 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	CTPS1	P17812	591 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	MAT2A	P31153	395 aa	Known RBP	18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	VIPR1	P32241	457 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	LIG3	P49916	1009 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	RACK1	P63244	317 aa	Known RBP	18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	PRPSAP1	Q14558	356 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	PCSK7	Q16549	785 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	CCDC137	Q6PK04	289 aa	Known RBP	18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	CRTC1	Q6UUV9	634 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	KDELC2	Q7Z4H8	507 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	NDUFAF2	Q8N183	169 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	LPCAT1	Q8NF37	534 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	LENG8	Q96PV6	779 aa	Predicted RBP	18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	KLF6	Q99612	283 aa	Predicted RBP	18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	DMTF1	Q9Y222	760 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	ACACA	Q13085	2346 aa		18.16	■□□□□ 0.5
VEGFA-222	ENST00000520948	GOLGA4	Q13439	2230 aa	Known RBP	18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	LOC400499	M0QZD8	3231 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	COL5A1	P20908	1838 aa	Predicted RBP	18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	WNT9A	O14904	365 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	VILL	O15195	856 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	HEXIM1	O94992	359 aa	Known RBP	18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	PAK4	O96013	591 aa	Predicted RBP	18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	AGT	P01019	485 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	WNT1	P04628	370 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	ZSCAN5DP	P0CG00	497 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	CYP2A6	P11509	494 aa	Predicted RBP	18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	LHCGR	P22888	699 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	NFKBIA	P25963	317 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	FNTA	P49354	379 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	EPHB1	P54762	984 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	CLDN6	P56747	220 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	MSLN	Q13421	630 aa	Predicted RBP	18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	CAMK2B	Q13554	666 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	GALNT3	Q14435	633 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	SLC1A5	Q15758	541 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	INAVA	Q3KP66	663 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	SETMAR	Q53H47	684 aa	Predicted RBP	18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	C4orf22	Q6V702	233 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	USP45	Q70EL2	814 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	PAF1	Q8N7H5	531 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	CXorf40A	Q8TE69	158 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	KLK6	Q92876	244 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	IFT43	Q96FT9	208 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	WRAP53	Q9BUR4	548 aa	Known RBP	18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	ETNK1	Q9HBU6	452 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	ARNT2	Q9HBZ2	717 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	MAGEE1	Q9HCI5	957 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	AASDHPPT	Q9NRN7	309 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948	PAK5	Q9P286	719 aa		18.15	■□□□□ 0.5
VEGFA-222	ENST00000520948		A0A0U1RQS6	177 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948		A0A1B0GTQ1	180 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	CAPN8	A6NHC0	703 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948		A8MX80	341 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	KIF2A	O00139	706 aa	Predicted RBP	18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	PSMD3	O43242	534 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	TM7SF2	O76062	418 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	C6	P13671	934 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	FDFT1	P37268	417 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	PAFAH1B1	P43034	410 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	PTS	Q03393	145 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	SEMA5A	Q13591	1074 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	SMAD1	Q15797	465 aa	Known RBP	18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	CNGA3	Q16281	694 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	SIRPB2	Q5JXA9	342 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	DENND5A	Q6IQ26	1287 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	TSPAN33	Q86UF1	283 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	CCDC89	Q8N998	374 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	TMEM145	Q8NBT3	493 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	IPMK	Q8NFU5	416 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	SLCO2A1	Q92959	643 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	CENPT	Q96BT3	561 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	CRELD1	Q96HD1	420 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	COQ10A	Q96MF6	247 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	ELF4	Q99607	663 aa	Predicted RBP	18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	DKK4	Q9UBT3	224 aa		18.14	■□□□□ 0.49
VEGFA-222	ENST00000520948	PCYOX1	Q9UHG3	505 aa		18.14	■□□□□ 0.49

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