RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CARS2Q9HA77 564 aaKnown RBP25.3■■□□□ 1.64
VEGFA-220ENST00000519767 ZNHIT6Q9NWK9 470 aaKnown RBP25.3■■□□□ 1.64
VEGFA-220ENST00000519767 TRNAU1APQ9NX07 287 aaKnown RBP25.3■■□□□ 1.64
VEGFA-220ENST00000519767 MGAQ8IWI9 3026 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 NUDT21O43809 227 aaKnown RBP25.29■■□□□ 1.64
VEGFA-220ENST00000519767 MFSD11O43934 449 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 NOBOXO60393 691 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 TNFSF15O95150 251 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 CA4P22748 312 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 LHCGRP22888 699 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 MAN1A1P33908 653 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 ILF3Q12906 894 aaKnown RBP eCLIP25.29■■□□□ 1.64
VEGFA-220ENST00000519767 TECPR1Q7Z6L1 1165 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 DNAJC7Q99615 494 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 GSDMCQ9BYG8 508 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 RBM22Q9NW64 420 aaKnown RBP eCLIP25.29■■□□□ 1.644e-11■■■■□ 26.1
VEGFA-220ENST00000519767 LRIT1Q9P2V4 623 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 DNPEPQ9ULA0 475 aa25.29■■□□□ 1.64
VEGFA-220ENST00000519767 A0A1W2PQM1 296 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 SSU72P8A0A1W2PR75 194 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 CDRT15L2A8MXV6 281 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 D6RAR5 112 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 KLK10O43240 276 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 ITGA2BP08514 1039 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 PDHA1P08559 390 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 CCNB1P14635 433 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 ZNF30P17039 623 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 PDX1P52945 283 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 EPHB1P54762 984 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 INHBCP55103 352 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 TMPRSS3P57727 454 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 CXADRP78310 365 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 CDK3Q00526 305 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 HLTFQ14527 1009 aaKnown RBP eCLIP25.28■■□□□ 1.646e-8■■□□□ 12.7
VEGFA-220ENST00000519767 ASTE1Q2TB18 679 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-220ENST00000519767 FOXR1Q6PIV2 292 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 CLEC14AQ86T13 490 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 CCNJLQ8IV13 435 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 RAVER1Q8IY67 606 aaKnown RBP25.28■■□□□ 1.64
VEGFA-220ENST00000519767 FAF2Q96CS3 445 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 FRMD8Q9BZ67 464 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-220ENST00000519767 DEF6Q9H4E7 631 aa25.28■■□□□ 1.64
VEGFA-220ENST00000519767 ANKRD36A6QL64 1941 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 A0A0J9YYE9 177 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 PLD2O14939 933 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 CASC3O15234 703 aaKnown RBP25.27■■□□□ 1.64
VEGFA-220ENST00000519767 ATXN7O15265 892 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-220ENST00000519767 ZW10O43264 779 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 TRBC1P01850 177 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 PYGLP06737 847 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 CTPS1P17812 591 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 CCKBRP32239 447 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 GJC1P36383 396 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 TAS2R40P59535 323 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 RPL26P61254 145 aaKnown RBP25.27■■□□□ 1.64
VEGFA-220ENST00000519767 SKOR1P84550 965 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 RAET1GQ6H3X3 334 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 ZNF765Q7L2R6 523 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 RAB11FIP2Q7L804 512 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 TSPAN33Q86UF1 283 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 FBXO39Q8N4B4 442 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 Q8N9G6 341 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-220ENST00000519767 CCL4L1Q8NHW4 92 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 RPL26L1Q9UNX3 145 aaKnown RBP25.27■■□□□ 1.64
VEGFA-220ENST00000519767 SLC17A4Q9Y2C5 497 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 SSUH2Q9Y2M2 353 aa25.27■■□□□ 1.64
VEGFA-220ENST00000519767 GOLGA6CA6NDK9 693 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 GOLGA6BA6NDN3 693 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 B4DGG1 531 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 AKR1B10O60218 316 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 TPM1P09493 284 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 TMEM253P0C7T8 217 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 GOLGA6DP0CG33 693 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 GPR1P46091 355 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 PTSQ03393 145 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 ZFYVE27Q5T4F4 411 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 NRSN1Q8IZ57 195 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 TMEM159Q96B96 161 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 AP2M1Q96CW1 435 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 EPB41L5Q9HCM4 733 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 GOLGA6AQ9NYA3 693 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 PCDHGA7Q9Y5G6 932 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 RNF215Q9Y6U7 377 aa25.26■■□□□ 1.63
VEGFA-220ENST00000519767 FUCA1P04066 466 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 IVLP07476 585 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 ARHGAP25P42331 645 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 LRRC66Q68CR7 880 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 ADAMTSL4Q6UY14 1074 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 SPRED1Q7Z699 444 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 B3GNT8Q7Z7M8 397 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 C17orf82Q86X59 251 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-220ENST00000519767 NRROSQ86YC3 692 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 PQLC3Q8N755 202 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 CCNYQ8ND76 341 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 ARRDC2Q8TBH0 407 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 SCARF2Q96GP6 870 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-220ENST00000519767 ZNF830Q96NB3 372 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-220ENST00000519767 PACSIN1Q9BY11 444 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 ABCG8Q9H221 673 aa25.25■■□□□ 1.63
VEGFA-220ENST00000519767 SPATS2LQ9NUQ6 558 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms