RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SCP2P22307 547 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 ALAS2P22557 587 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 MST1P26927 711 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 MAN1A1P33908 653 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 CHRNA4P43681 627 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 SLC11A2P49281 568 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 GFERP55789 205 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 CLDN10P78369 228 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 PPP2R2BQ00005 443 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 SULT2A1Q06520 285 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 TFF3Q07654 80 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 EFHC1Q5JVL4 640 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 TTC38Q5R3I4 469 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 FAAH2Q6GMR7 532 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 MSANTD2Q6P1R3 559 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 C16orf47Q6ZP98 133 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 CCAR2Q8N163 923 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 GPD1LQ8N335 351 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 AZIN2Q96A70 460 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 TRIM11Q96F44 468 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 WDR92Q96MX6 357 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 OR6C1Q96RD1 312 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 LGR4Q9BXB1 951 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 GPR87Q9BY21 358 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 VRTNQ9H8Y1 702 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 OLAHQ9NV23 265 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 ARHGEF38Q9NXL2 777 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 DNAJB12Q9NXW2 375 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 TAAR2Q9P1P5 351 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNHIT2Q9UHR6 403 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 TINAGQ9UJW2 476 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 HS3ST2Q9Y278 367 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 R3HCC1Q9Y3T6 440 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 ACTL7AQ9Y615 435 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.75□□□□□ -1.331e-6■■□□□ 14.5
CTNNA1-216ENST00000519489 TRBV23OR9-2A0A075B6M9 112 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 SERINC4A6NH21 518 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 C16orf96A6NNT2 1141 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 SPTLC2O15270 562 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 CREB3O43889 395 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 CTAG2O75638 210 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 UNC5CO95185 931 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 EML2O95834 649 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 LDHAP00338 332 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 CAPN1P07384 714 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 DLATP10515 647 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 FGF5P12034 268 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 CCNB1P14635 433 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 XBP1P17861 261 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 DNASE1P24855 282 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 ASPAP45381 313 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 TOB1P50616 345 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 TKTL1P51854 596 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 VAV2P52735 878 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 KRTAP1-1Q07627 177 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 MYBPC3Q14896 1274 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 PCOLCEQ15113 449 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 TBCELQ5QJ74 424 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 L1TD1Q5T7N2 865 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 RAP1GAP2Q684P5 730 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 SPOPLQ6IQ16 392 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 PWWP2BQ6NUJ5 590 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 WDR74Q6RFH5 385 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 GFRALQ6UXV0 394 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 ARHGAP18Q8N392 663 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 ZADH2Q8N4Q0 377 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 TMEM102Q8N9M5 508 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 SLC38A9Q8NBW4 561 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 ATL2Q8NHH9 583 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 NCSTNQ92542 709 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 SLC39A13Q96H72 371 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 PRMT1Q99873 361 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 DPYSL5Q9BPU6 564 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 WDR77Q9BQA1 342 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 WRAP53Q9BUR4 548 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 TSPAN10Q9H1Z9 355 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 NEUROD4Q9HD90 331 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 C1GALT1Q9NS00 363 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 TBC1D7Q9P0N9 293 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 TMEM63CQ9P1W3 806 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 VPS51Q9UID3 782 aa6.75□□□□□ -1.33
CTNNA1-216ENST00000519489 TRIM49BA6NDI0 452 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 TMEM110-MUSTN1A8MSY1 372 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 FAM171A2A8MVW0 826 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 TOR1BO14657 336 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 SMAD7O15105 426 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNHIT1O43257 154 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 CUTAO60888 179 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 ATE1O95260 518 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 MOCS2O96007 188 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 FYNP06241 537 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 PRKCSHP14314 528 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 TACR2P21452 398 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 HOXD13P35453 343 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 CASP4P49662 377 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 TBX4P57082 545 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 GPLD1P80108 840 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 GUCY1B3Q02153 619 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 CCDC15Q0P6D6 951 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms