RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 KIAA1024LP59773 190 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 SRP54P61011 504 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 SLC10A7Q0GE19 358 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 RALGDSQ12967 914 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 ZNF235Q14590 738 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 POLNQ7Z5Q5 900 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 DAAM2Q86T65 1068 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 NT5DC3Q86UY8 548 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 ARL10Q8N8L6 244 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 NIPA2Q8N8Q9 360 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 OR6C4Q8NGE1 309 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 COG1Q8WTW3 980 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 TEKT4Q8WW24 435 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 HES6Q96HZ4 224 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 HIC2Q96JB3 615 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 CAPZA3Q96KX2 299 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 BBC3Q96PG8 261 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 LGMNQ99538 433 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 CCDC3Q9BQI4 270 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 THSD1Q9NS62 852 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 KCTD5Q9NXV2 234 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 LCMT1Q9UIC8 334 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 OR1A2Q9Y585 309 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 ENTPD2Q9Y5L3 495 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 DGKBQ9Y6T7 804 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 LOC400499M0QZD8 3231 aa12.49□□□□□ -0.41
TRAPPC9-206ENST00000519482 EIF4E1BA6NMX2 242 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 CCDC188H7C350 402 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 CACNB4O00305 520 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 PDE2AO00408 941 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 TNFRSF10CO14798 259 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 ZNF185O15231 689 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 FTCDO95954 541 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 PCCBP05166 539 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 CELA2BP08218 269 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 RARAP10276 462 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 NFKBIAP25963 317 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 SERPINB6P35237 376 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 TRIM23P36406 574 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 TLE3Q04726 772 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 RALGPS1Q5JS13 557 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 C11orf63Q6NUN7 778 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 CRTC1Q6UUV9 634 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 HDXQ7Z353 690 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 RD3Q7Z3Z2 195 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 SPACA3Q8IXA5 215 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 TP53INP2Q8IXH6 220 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 BBS5Q8N3I7 341 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 NOA1Q8NC60 698 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 PLA2G15Q8NCC3 412 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 LSM14AQ8ND56 463 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 OR56A4Q8NGH8 313 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 PCDH19Q8TAB3 1148 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.48□□□□□ -0.413e-6■■■■■ 50.3
TRAPPC9-206ENST00000519482 ATXN7L3BQ96GX2 97 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 FCRL3Q96P31 734 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 CSPG4P5Q96PW8 444 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 NUDCD1Q96RS6 583 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 RBM15Q96T37 977 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 THAP2Q9H0W7 228 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 ASCL3Q9NQ33 180 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 FAM53CQ9NYF3 392 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 CTTNBP2NLQ9P2B4 639 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 GULP1Q9UBP9 304 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 IP6K2Q9UHH9 426 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 PCDHGA8Q9Y5G5 932 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 ARHGEF17Q96PE2 2063 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-206ENST00000519482 TEX51A0A1B0GUA7 166 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 TK2O00142 265 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 NTN3O00634 580 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 HTRA2O43464 458 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 MAFKO60675 156 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 PEX11BO96011 259 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 RHOXF2BP0C7M4 288 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 GM2AP17900 193 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 CR2P20023 1033 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 AMPD1P23109 780 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 RBMS1P29558 406 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 MLLT3P42568 568 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 UCNP55089 124 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 CDH6P55285 790 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 SPIDRQ14159 915 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 GPR155Q7Z3F1 870 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 LRRC49Q8IUZ0 686 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 RASGEF1CQ8N431 466 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 UBL4BQ8N7F7 174 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 EIF1ADQ8N9N8 165 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 NSMCE1Q8WV22 266 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 HSPH1Q92598 858 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 FUBP1Q96AE4 644 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 PDXPQ96GD0 296 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 SLC46A1Q96NT5 459 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 RHOXF2Q9BQY4 288 aa12.47□□□□□ -0.41
TRAPPC9-206ENST00000519482 DPH1Q9BZG8 443 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms