RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 RNASE9P60153 205 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 CTBSQ01459 385 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 APBA1Q02410 837 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 PTK2Q05397 1052 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 BIRC2Q13490 618 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 SEMA5AQ13591 1074 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 PARP15Q460N3 678 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 CFAP58Q5T655 872 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 RWDD4Q6NW29 188 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 KDELC2Q7Z4H8 507 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 SLC47A2Q86VL8 602 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 TMEM35BQ8NCS4 154 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 OR10G6Q8NH81 332 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 NTAN1Q96AB6 310 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 C18orf8Q96DM3 657 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 COQ10AQ96MF6 247 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 CTRCQ99895 268 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 SLC29A3Q9BZD2 475 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 KLC2Q9H0B6 622 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 ZNF768Q9H5H4 540 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 ATP13A3Q9H7F0 1226 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 PHPT1Q9NRX4 125 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 KCTD5Q9NXV2 234 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 SUFUQ9UMX1 484 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 SLC17A4Q9Y2C5 497 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 PCDHB3Q9Y5E6 796 aa8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 DIDO1Q9BTC0 2240 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-215ENST00000519309 CCDC168Q8NDH2 2452 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 BICDL2A1A5D9 508 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 GTPBP10A4D1E9 387 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 RASA4BC9J798 803 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 RASA4O43374 803 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 BUB1BO60566 1050 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 LSM8O95777 96 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 SERPINA4P29622 427 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 CLCN1P35523 988 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 DLSTP36957 453 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 ADCY8P40145 1251 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 USP8P40818 1118 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 EPHA4P54764 986 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 CDK3Q00526 305 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 PAK1Q13153 545 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 CYTH1Q15438 398 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 SLC34A3Q8N130 599 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 SFRP1Q8N474 314 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 SLC37A2Q8TED4 501 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 NUS1Q96E22 293 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 TCTN2Q96GX1 697 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 PHF12Q96QT6 1004 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 TRIM55Q9BYV6 548 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 ULBP3Q9BZM4 244 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 ZMYND15Q9H091 742 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 EPB41L1Q9H4G0 881 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 SARS2Q9NP81 518 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 SIX2Q9NPC8 291 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 PLCB1Q9NQ66 1216 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 CASS4Q9NQ75 786 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 DONSONQ9NYP3 566 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 CHMP5Q9NZZ3 219 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 KIAA1468Q9P260 1216 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 RCOR3Q9P2K3 495 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 UBA2Q9UBT2 640 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 HOOK1Q9UJC3 728 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 MOSPD1Q9UJG1 213 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 ERRFI1Q9UJM3 462 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 AJAP1Q9UKB5 411 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 CROTQ9UKG9 612 aa8.37□□□□□ -1.07
CTNNA1-215ENST00000519309 CSMD2Q7Z408 3487 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 CROCCQ5TZA2 2017 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 WASH4PA8MWX3 477 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 TCP11X1B4DZS4 312 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 TRAFD1O14545 582 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 POLR1CO15160 346 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 CREG1O75629 220 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 MAP3K6O95382 1288 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 PLEKP08567 350 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 SLC9A1P19634 815 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 VARSP26640 1264 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 ACTR1BP42025 376 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 PTPN9P43378 593 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 NOP2P46087 812 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 GNPDA1P46926 289 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 RGRP47804 291 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 PGDP52209 483 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 ACTR1AP61163 376 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 UBE2HP62256 183 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 ATP11AP98196 1134 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 LRP8Q14114 963 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 INPP5JQ15735 1006 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 CNGA3Q16281 694 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 KRTAP21-3Q3LHN1 58 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 RAB6CQ53S08 254 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 STRADAQ7RTN6 431 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 LYSMD3Q7Z3D4 306 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 TMEM135Q86UB9 458 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 CAMK1DQ8IU85 385 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 FAM71AQ8IYT1 594 aa8.36□□□□□ -1.07
CTNNA1-215ENST00000519309 UMODL1-AS1Q8N2C9 162 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms