RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 RNF187Q5TA31 235 aaPredicted RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 FAXCQ5TGI0 409 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 ANKRD22Q5VYY1 191 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 NCEH1Q6PIU2 408 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 C4orf22Q6V702 233 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 USP30Q70CQ3 517 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 BZW1Q7L1Q6 419 aaKnown RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 CHST9Q7L1S5 443 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 TADA2BQ86TJ2 420 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 SPATS2Q86XZ4 545 aaKnown RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 SRRM1Q8IYB3 904 aaKnown RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 CCDC185Q8N715 623 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 PLD5Q8N7P1 536 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.49□□□□□ -1.21
PVT1-206ENST00000517838 SNRNP27Q8WVK2 155 aaKnown RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 CPT1BQ92523 772 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 SKA1Q96BD8 255 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 QKIQ96PU8 341 aaKnown RBP eCLIP7.49□□□□□ -1.211e-6■■■■□ 23.4
PVT1-206ENST00000517838 CDK5RAP1Q96SZ6 601 aaKnown RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 PAIP2Q9BPZ3 127 aaKnown RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 TRIM62Q9BVG3 475 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 RSPH9Q9H1X1 276 aaPredicted RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 PPCSQ9HAB8 311 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 FBRSQ9HAH7 460 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 POPDC2Q9HBU9 364 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 LRRC4CQ9HCJ2 640 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 AASDHPPTQ9NRN7 309 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 ABCB8Q9NUT2 735 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 FBXL12Q9NXK8 326 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 MARCH2Q9P0N8 246 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 SAMD15Q9P1V8 674 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 PSMC3IPQ9P2W1 217 aaPredicted RBP7.49□□□□□ -1.21
PVT1-206ENST00000517838 CTNNAL1Q9UBT7 734 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 SLC12A6Q9UHW9 1150 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 CHMP2BQ9UQN3 213 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 PCDHB1Q9Y5F3 818 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 KNTC1P50748 2209 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 CABIN1Q9Y6J0 2220 aa7.49□□□□□ -1.21
PVT1-206ENST00000517838 CEP192Q8TEP8 1941 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 COL12A1Q99715 3063 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 GOLGA6L7A0A1B0GV03 622 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 SLC12A8A0AV02 714 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 TMEM120BA0PK00 339 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 ZNF487B1APH4 448 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 RASA4BC9J798 803 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 F5H423 210 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 TRIM38O00635 465 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 PPP1R12AO14974 1030 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 YKT6O15498 198 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 RASA4O43374 803 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 SLC28A2O43868 658 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 BANF1O75531 89 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 LTFP02788 710 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 MPOP05164 745 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 BRAFP15056 766 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 AMPD1P23109 780 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 ACP1P24666 158 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 RBL1P28749 1068 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 L1CAMP32004 1257 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 STX2P32856 288 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 ARRB1P49407 418 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 RNF144AP50876 292 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 SEC24CP53992 1094 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 PCBP4P57723 403 aaKnown RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 DAOAP59103 153 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 TPI1P60174 286 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 SARNPP82979 210 aaKnown RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 CLN3Q13286 438 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 MTM1Q13496 603 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 FASTKD3Q14CZ7 662 aaKnown RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 TRIP4Q15650 581 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 DPYSL2Q16555 572 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 TTC31Q49AM3 519 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 MPPE1Q53F39 396 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 SLC45A4Q5BKX6 768 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 BROXQ5VW32 411 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 MBLAC2Q68D91 279 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 ZNF776Q68DI1 518 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 SLC9A4Q6AI14 798 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 FOXR1Q6PIV2 292 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 CYP4V2Q6ZWL3 525 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 VSIG1Q86XK7 387 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 CACNA2D3Q8IZS8 1091 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 SLC25A45Q8N413 288 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 CCNYQ8ND76 341 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 FBXO36Q8NEA4 188 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 PCDH19Q8TAB3 1148 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 GDAP1Q8TB36 358 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 GANCQ8TET4 914 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 WFIKKN2Q8TEU8 576 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 RNF139Q8WU17 664 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 TFB1MQ8WVM0 346 aaKnown RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 KCTD13Q8WZ19 329 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 TMA16Q96EY4 203 aaKnown RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 CHMP6Q96FZ7 201 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 MED8Q96G25 268 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 MYO19Q96H55 970 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 ZNF578Q96N58 590 aaPredicted RBP7.48□□□□□ -1.21
PVT1-206ENST00000517838 CSPG4P5Q96PW8 444 aa7.48□□□□□ -1.21
PVT1-206ENST00000517838 SMC6Q96SB8 1091 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms