RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 UTP15Q8TED0 518 aaKnown RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 WDR83Q9BRX9 315 aaKnown RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 COQ10BQ9H8M1 238 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ARHGEF4Q9NR80 690 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CHRAC1Q9NRG0 131 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CACNG4Q9UBN1 327 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNHIT2Q9UHR6 403 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 BTRCQ9Y297 605 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 C1orf232A0A0U1RR37 186 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 LINC00854A0A1B0GVQ3 168 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ASGR1P07306 291 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ICAM3P32942 547 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 PCYT1AP49585 367 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 MSLNQ13421 630 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CCDC92Q53HC0 331 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZYG11AQ6WRX3 759 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CAMK1DQ8IU85 385 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 DNAJB14Q8TBM8 379 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 CLEC4CQ8WTT0 213 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 LPGAT1Q92604 370 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 LPIN3Q9BQK8 851 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 XYLT2Q9H1B5 865 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 USE1Q9NZ43 259 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 RBPJLQ9UBG7 517 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 NUMBLQ9Y6R0 609 aa10.85□□□□□ -0.67
PCDHGA1-202ENST00000517417 SLC7A2P52569 658 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 POLR2LP62875 67 aaKnown RBP10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 IL5RAQ01344 420 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 FAM98BQ52LJ0 330 aaKnown RBP10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 TMCO5AQ8N6Q1 288 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 TERB1Q8NA31 727 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 GIPC3Q8TF64 312 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 BBS2Q9BXC9 721 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 BCO2Q9BYV7 579 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZFP14Q9HCL3 533 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 SPG21Q9NZD8 308 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 A0A1W2PQH9 124 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 HSMCR30P0CW71 290 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 RAD23AP54725 363 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 IRF8Q02556 426 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 ACSM2AQ08AH3 577 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 SETMARQ53H47 684 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 ACSM2BQ68CK6 577 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 PIWIL4Q7Z3Z4 852 aaKnown RBP10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 TRIM74Q86UV6 250 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 TRIM73Q86UV7 250 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 CNTD1Q8N815 330 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 SELENOMQ8WWX9 145 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 TPD52L3Q96J77 140 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 DEFB118Q96PH6 123 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 TCF12Q99081 682 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 C9orf16Q9BUW7 83 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 PRDM16Q9HAZ2 1276 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 PDLIM7Q9NR12 457 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 A0A087X1B8 175 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 PTGES3LE9PB15 166 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 LDLRP01130 860 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 LBPP18428 481 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 POLR2EP19388 210 aaKnown RBP10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 SGCGQ13326 291 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 DPYSL2Q16555 572 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 USP41Q3LFD5 358 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 GPR107Q5VW38 600 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 FOXB2Q5VYV0 432 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 BNIPLQ7Z465 357 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 DHRSXQ8N5I4 330 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 UROC1Q96N76 676 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 FAM126AQ9BYI3 521 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 C20orf27Q9GZN8 174 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 COMMD8Q9NX08 183 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 CIDEBQ9UHD4 219 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 MFHAS1Q9Y4C4 1052 aa10.84□□□□□ -0.67
PCDHGA1-202ENST00000517417 CCL22O00626 93 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 GRK4P32298 578 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 PTPN9P43378 593 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 IL23RQ5VWK5 629 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 VPS33AQ96AX1 596 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 OXCT2Q9BYC2 517 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 PCDHAC1Q9H158 963 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 RHOJQ9H4E5 214 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 POLR1BQ9H9Y6 1135 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 HGFP14210 728 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 HOXB8P17481 243 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 S100A3P33764 101 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 MTA1Q13330 715 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 FNDC3BQ53EP0 1204 aaKnown RBP10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 CCDC157Q569K6 752 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 NCBP2-AS2Q69YL0 99 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 CNSTQ6PJW8 725 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 LDB1Q86U70 411 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 STX19Q8N4C7 294 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 SPATA22Q8NHS9 363 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 BDH2Q9BUT1 245 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 ABCG8Q9H221 673 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 SIX4Q9UIU6 781 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 VWA7Q9Y334 891 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 SNX10Q9Y5X0 201 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 XYLBO75191 536 aa10.83□□□□□ -0.68
PCDHGA1-202ENST00000517417 CYP7B1O75881 506 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms