RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 LRRC57Q8N9N7 239 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 TC2NQ8N9U0 490 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 SLC44A5Q8NCS7 719 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 AGBL3Q8NEM8 1001 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 APPL2Q8NEU8 664 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 TSPAN14Q8NG11 270 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 DEPDC1BQ8WUY9 529 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 ZKSCAN4Q969J2 545 aaPredicted RBP3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 VPS33AQ96AX1 596 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 VMP1Q96GC9 406 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 VCPIP1Q96JH7 1222 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 EGLN2Q96KS0 407 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 SH3GL2Q99962 352 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 HGH1Q9BTY7 390 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 MSTO1Q9BUK6 570 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 ZNF341Q9BYN7 854 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 SIL1Q9H173 461 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 MMP27Q9H306 513 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 ESRP2Q9H6T0 727 aaKnown RBP3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 ANKZF1Q9H8Y5 726 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 MAP6D1Q9H9H5 199 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 MBNL1Q9NR56 388 aaKnown RBP3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 PAG1Q9NWQ8 432 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 WDR35Q9P2L0 1181 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 RAP2CQ9Y3L5 183 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 CLIC4Q9Y696 253 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 ZFP37Q9Y6Q3 630 aaPredicted RBP3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 ARHGEF40Q8TER5 1519 aa3.39□□□□□ -1.87
RNU6-840P-201ENST00000517275 A6NL46 340 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ATP2A1O14983 1001 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 SLC7A4O43246 635 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ATG13O75143 517 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ATP2C2O75185 946 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 PSMD10O75832 226 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 MTA2O94776 668 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 BAG2O95816 211 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 IFNA2P01563 188 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 PRKCGP05129 697 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ANXA7P20073 488 aaKnown RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 RFC1P35251 1148 aaPredicted RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 GP5P40197 560 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 PRCPP42785 496 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 METAP2P50579 478 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 CLCN5P51795 746 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 KRTAP10-2P60368 255 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 SIRPAP78324 504 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 STIM1Q13586 685 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 MYBPC2Q14324 1141 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 HYAL4Q2M3T9 481 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 SMTNL2Q2TAL5 461 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 C6orf10Q5SRN2 563 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 LRIF1Q5T3J3 769 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 FRG2Q64ET8 278 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 HEPHL1Q6MZM0 1159 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 METTL2BQ6P1Q9 378 aaKnown RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 FBXO46Q6PJ61 603 aaPredicted RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ZNF66Q6ZN08 573 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ERN2Q76MJ5 926 aaKnown RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 TAOK1Q7L7X3 1001 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 MRGPRGQ86SM5 289 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 GLRX5Q86SX6 157 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 OR8H3Q8N146 312 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 LPGAT1Q92604 370 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 EME1Q96AY2 570 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 MSI2Q96DH6 328 aaKnown RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ERO1AQ96HE7 468 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ZNF419Q96HQ0 510 aaPredicted RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 METTL2AQ96IZ6 378 aaKnown RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 LRRC3BQ96PB8 259 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 SPAG5Q96R06 1193 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 WDR77Q9BQA1 342 aaPredicted RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 TMEM79Q9BSE2 394 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 RTN4RQ9BZR6 473 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 GPR88Q9GZN0 384 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 NPFFR1Q9GZQ6 430 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 SPATC1LQ9H0A9 340 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 EPB41L5Q9HCM4 733 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 CYSLTR2Q9NS75 346 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 TMEM45AQ9NWC5 275 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 TRMT1Q9NXH9 659 aaKnown RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 FLRT1Q9NZU1 646 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 PLEKHB1Q9UF11 243 aaPredicted RBP3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 GTF3C4Q9UKN8 822 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 ACSL5Q9ULC5 683 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 WDR17Q8IZU2 1322 aa3.38□□□□□ -1.87
RNU6-840P-201ENST00000517275 A0A087WV48 116 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 TMEM8BA6NDV4 472 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 PSMD14O00487 310 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 CHL1O00533 1208 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 CLGNO14967 610 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 PLRG1O43660 514 aaKnown RBP3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 UGDHO60701 494 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 GPC4O75487 556 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 SOX30O94993 753 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 CHRNB2P17787 502 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 ATP5DP30049 168 aa3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 BUD31P41223 144 aaPredicted RBP3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 COMPP49747 757 aaPredicted RBP3.37□□□□□ -1.87
RNU6-840P-201ENST00000517275 SUOXP51687 545 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms