RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 H2AFXP16104 143 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 GAP43P17677 238 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 LIG1P18858 919 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 GLRA2P23416 452 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 CYP2F1P24903 491 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 CDC25AP30304 524 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 CDC25BP30305 580 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 UQCRC1P31930 480 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SRP14P37108 136 aaKnown RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PSMD8P48556 350 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF75DP51815 510 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 NDST2P52849 883 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SNRPFP62306 86 aaKnown RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 CCZ1BP86790 482 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 CCZ1P86791 482 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 OCRLQ01968 901 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ALCAMQ13740 583 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PDE1CQ14123 709 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 TERF2Q15554 542 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 INAQ16352 499 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ACKR1Q16570 336 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 KYAT1Q16773 422 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 KMT5BQ4FZB7 885 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM259Q4ZIN3 620 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 MDH1BQ5I0G3 518 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SNAP47Q5SQN1 464 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM69BQ5VUD6 431 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 NKAIN2Q5VXU1 208 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 RRAGBQ5VZM2 374 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 RESP18Q5W5W9 173 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 EEF1DP3Q658K8 133 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM173BQ6P4H8 233 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 LVRNQ6Q4G3 990 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 IGFL2Q6UWQ7 119 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ZPBP2Q6X784 338 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 DSTYKQ6XUX3 929 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 HTR3DQ70Z44 454 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PPP1R32Q7Z5V6 425 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SATL1Q86VE3 508 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SPNS2Q8IVW8 549 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SFTPA2Q8IWL1 248 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ZBTB8OSQ8IWT0 167 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM130Q8N3G9 435 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 MAPKAPK5-AS1Q8N8E1 139 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 DCAF4L2Q8NA75 395 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF397Q8NF99 534 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 BHLHE22Q8NFJ8 381 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 LEO1Q8WVC0 666 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF516Q92618 1163 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 RAD54LQ92698 747 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM131CQ96AQ9 280 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 EPSTI1Q96J88 318 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SEC16BQ96JE7 1060 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SPATA32Q96LK8 384 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 TIGD1Q96MW7 591 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 C18orf15Q96N68 181 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 TBCBQ99426 244 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 C7orf25Q9BPX7 421 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ZSWIM1Q9BR11 485 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 FSD1LQ9BXM9 530 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM168Q9H0V1 697 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 UBTD1Q9HAC8 227 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PARVGQ9HBI0 331 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 XPNPEP1Q9NQW7 623 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ST7Q9NRC1 585 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 OLFML3Q9NRN5 406 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 BLOC1S4Q9NUP1 217 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PRMT7Q9NVM4 692 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 NECAP2Q9NVZ3 263 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF446Q9NWS9 450 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 CGNQ9P2M7 1197 aaKnown RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ARHGAP28Q9P2N2 729 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 TFIP11Q9UBB9 837 aaKnown RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SUN2Q9UH99 717 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 HOOK1Q9UJC3 728 aaKnown RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 RPUSD1Q9UJJ7 312 aaKnown RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PCDHA7Q9UN72 937 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PLA2G4CQ9UP65 541 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 HPSEQ9Y251 543 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 NYNRINQ9P2P1 1898 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SRRM2Q9UQ35 2752 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 MBD3L3A6NE82 208 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 POM121BA6NF01 834 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 C2orf81A6NN90 581 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 USP27XA6NNY8 438 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 PP2D1A8MPX8 630 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 E9PMD0 336 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 K7ERI5 159 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 ZBTB39O15060 712 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 KIAA0391O15091 583 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 THAP12O43422 761 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 HTRA2O43464 458 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 PLRG1O43660 514 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 NUDT21O43809 227 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 USO1O60763 962 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 HIP1RO75146 1068 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SOCS5O75159 536 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TBCAO75347 108 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms