RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PCBP4P57723 403 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 ERVPABLB-1P60509 514 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 RPL26P61254 145 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 IFI35P80217 286 aaPredicted RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 PPIDQ08752 370 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 NIPAL4Q0D2K0 466 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 SPIDRQ14159 915 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 TCEAL1Q15170 157 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 TSR1Q2NL82 804 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 C3orf38Q5JPI3 329 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 CERCAMQ5T4B2 595 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 LRRC38Q5VT99 294 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 RAET1GQ6H3X3 334 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 Q6ZVL8 140 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 ZNF765Q7L2R6 523 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 TAF8Q7Z7C8 310 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 CCDC13Q8IYE1 715 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 NDUFAF2Q8N183 169 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 CCL4L1Q8NHW4 92 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 GPBAR1Q8TDU6 330 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 LRRN4Q8WUT4 740 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 PRR11Q96HE9 360 aaPredicted RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 ZNF830Q96NB3 372 aaPredicted RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 OLFM3Q96PB7 478 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 SMIM14Q96QK8 99 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 LYSMD1Q96S90 227 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 CARS2Q9HA77 564 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 CYP4F12Q9HCS2 524 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 APPL1Q9UKG1 709 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 DNPEPQ9ULA0 475 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 INTUQ9ULD6 942 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 RPL26L1Q9UNX3 145 aaKnown RBP10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 SATB2Q9UPW6 733 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 SLC17A4Q9Y2C5 497 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 TTLL3Q9Y4R7 772 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 PCDHGA8Q9Y5G5 932 aa10.44□□□□□ -0.74
HMGXB3-205ENST00000514469 B4DGG1 531 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 AKR1B15C9JRZ8 316 aaPredicted RBP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 D6RAR5 112 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 KCNK1O00180 336 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 FUCA1P04066 466 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 KRT1P04264 644 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 IVLP07476 585 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 MMP2P08253 660 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 PNLIPP16233 465 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 GLB1P16278 677 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 STC1P52823 247 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 EPHB1P54762 984 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 PTSQ03393 145 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 TLE3Q04726 772 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 ZBTB17Q13105 803 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 C14orf28Q4W4Y0 310 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 ZFYVE27Q5T4F4 411 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 SARM1Q6SZW1 724 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 ADAMTSL4Q6UY14 1074 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 RFLNAQ6ZTI6 216 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 NRROSQ86YC3 692 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 SFTPA2Q8IWL1 248 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 SPACA3Q8IXA5 215 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 RAVER1Q8IY67 606 aaKnown RBP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 CCNYQ8ND76 341 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 ZNF248Q8NDW4 579 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 FAM46DQ8NEK8 389 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 KIAA1524Q8TCG1 905 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 SCARF2Q96GP6 870 aaPredicted RBP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 LIN37Q96GY3 246 aaPredicted RBP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 GFM1Q96RP9 751 aaKnown RBP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 LGMNQ99538 433 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 ABCG8Q9H221 673 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 PRORYQ9H606 182 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 SYNDIG1Q9H7V2 258 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 PCDH9Q9HC56 1237 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 THSD1Q9NS62 852 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 TRNAU1APQ9NX07 287 aaKnown RBP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 CD84Q9UIB8 345 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 MOSPD1Q9UJG1 213 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 SUFUQ9UMX1 484 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 CHKBQ9Y259 395 aa10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 TDRD6O60522 2096 aaKnown RBP10.43□□□□□ -0.74
HMGXB3-205ENST00000514469 CCDC187A0A096LP49 1063 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 A0A1W2PQM1 296 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 PMS2P1A4D2B8 440 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 GOLGA6CA6NDK9 693 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 GOLGA6BA6NDN3 693 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 APOL1O14791 398 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 NUDT21O43809 227 aaKnown RBP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 JCHAINP01591 159 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 RPLP0P05388 317 aaKnown RBP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 PYGLP06737 847 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 GOLGA6DP0CG33 693 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 CD86P42081 329 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 MLLT3P42568 568 aaPredicted RBP10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 SLC1A1P43005 524 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 GPR1P46091 355 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 GNPDA1P46926 289 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 CCL7P80098 99 aa10.42□□□□□ -0.74
HMGXB3-205ENST00000514469 SKOR1P84550 965 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms