RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 IZUMO3Q5VZ72 239 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 SEL1L3Q68CR1 1132 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 DENND2CQ68D51 928 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 ALG1LQ6GMV1 187 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 B4GALNT4Q76KP1 1039 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 PID1Q7Z2X4 250 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 ZC3H18Q86VM9 953 aaKnown RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 IQCHQ86VS3 1027 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 ZSWIM9Q86XI8 627 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 NAT8LQ8N9F0 302 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 FAM174AQ8TBP5 190 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 CXorf40AQ8TE69 158 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 PDCD6IPQ8WUM4 868 aaKnown RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 HTR3CQ8WXA8 447 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 KLHDC7BQ96G42 594 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 SLC6A18Q96N87 628 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 AGAP3Q96P47 875 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 VAT1Q99536 393 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 TMEM121Q9BTD3 319 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 EDEM2Q9BV94 578 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 GTPBP2Q9BX10 602 aaKnown RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 SLC25A51Q9H1U9 297 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 CDC42EP4Q9H3Q1 356 aaKnown RBP8.35□□□□□ -1.07
CCL28-204ENST00000514421 GLOD4Q9HC38 313 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 PCDH12Q9NPG4 1184 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 TMEM9BQ9NQ34 198 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 RXFP3Q9NSD7 469 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 SEPT10Q9P0V9 454 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 ANKRD6Q9Y2G4 727 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 PPIL1Q9Y3C6 166 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 TTLL3Q9Y4R7 772 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 SLCO1B1Q9Y6L6 691 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 RALGAPA1Q6GYQ0 2036 aa8.35□□□□□ -1.07
CCL28-204ENST00000514421 SPTBN4Q9H254 2564 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 FPGTO14772 594 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 SLC30A4O14863 429 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 SPINT1O43278 529 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 LZTS3O60299 673 aaPredicted RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 FZD6O60353 706 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 DFNA5O60443 496 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 SHBGP04278 402 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 WNT1P04628 370 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 RBP3P10745 1247 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 CYP2A6P11509 494 aaPredicted RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 TSHRP16473 764 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 CA4P22748 312 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 PTPN3P26045 913 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 RPL22P35268 128 aaKnown RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 CD86P42081 329 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 CTSKP43235 329 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 LIG3P49916 1009 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 GYS2P54840 703 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 RPL26P61254 145 aaKnown RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 BNC1Q01954 994 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 WASHC5Q12768 1159 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 GRIK2Q13002 908 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 GPS1Q13098 491 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 ZBTB17Q13105 803 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 FGL2Q14314 439 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 IHHQ14623 411 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 HLA-BQ31612 363 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 LRRC73Q5JTD7 316 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 DARS2Q6PI48 645 aaKnown RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 DPPA4Q7L190 304 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 GSTA5Q7RTV2 222 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 DCP2Q8IU60 420 aaKnown RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 PPIL6Q8IXY8 311 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 CBARPQ8N350 705 aaPredicted RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.34□□□□□ -1.07
CCL28-204ENST00000514421 TMEM145Q8NBT3 493 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 OR2W6PQ8NHA6 318 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 PIH1D2Q8WWB5 315 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 CENPTQ96BT3 561 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 HAUS1Q96CS2 278 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 SCRN2Q96FV2 425 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 IMP4Q96G21 291 aaKnown RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 BMFQ96LC9 184 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 TTC25Q96NG3 672 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 SERPINB12Q96P63 405 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 FAM118BQ9BPY3 351 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 RTKNQ9BST9 563 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 WRAP53Q9BUR4 548 aaKnown RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 C1QTNF7Q9BXJ2 289 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 FRMD8Q9BZ67 464 aaPredicted RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 PPCSQ9HAB8 311 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 FSCN3Q9NQT6 498 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 KCTD5Q9NXV2 234 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 DLL3Q9NYJ7 618 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 EURLQ9NYK6 297 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 FETUBQ9UGM5 382 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 GGT7Q9UJ14 662 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 TRHDEQ9UKU6 1024 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 RPL26L1Q9UNX3 145 aaKnown RBP8.34□□□□□ -1.07
CCL28-204ENST00000514421 ITM2BQ9Y287 266 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 SNX11Q9Y5W9 270 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 PLXND1Q9Y4D7 1925 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 FRYLO94915 3013 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 TRPM6Q9BX84 2022 aa8.34□□□□□ -1.07
CCL28-204ENST00000514421 PCNX2A6NKB5 2137 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms