RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 H2AFYO75367 372 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PDE5AO76074 875 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 KRT19P08727 400 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CLCN4P51793 760 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 HSD17B7P56937 341 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PEX6Q13608 980 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PPP2R5DQ14738 602 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 VEPH1Q14D04 833 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CRY1Q16526 586 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 DCAF6Q58WW2 860 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 GLRA4Q5JXX5 417 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 SH3PXD2AQ5TCZ1 1133 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 VWA5B1Q5TIE3 1220 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 AGAP7PQ5VUJ5 663 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 NCBP2-AS2Q69YL0 99 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 TMEM110Q86TL2 294 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ZC3HC1Q86WB0 502 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF354CQ86Y25 554 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CENPLQ8N0S6 344 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 FAM71DQ8N9W8 422 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PDZD8Q8NEN9 1154 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ACVR1CQ8NER5 493 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 STMN2Q93045 179 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 MCUR1Q96AQ8 359 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CCDC127Q96BQ5 260 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 C12orf43Q96C57 262 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ALPK1Q96QP1 1244 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 TWNKQ96RR1 684 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CDK5RAP1Q96SZ6 601 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 RBBP8Q99708 897 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PRDM12Q9H4Q4 367 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 VPS37BQ9H9H4 285 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 MAGEE1Q9HCI5 957 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PNPLA3Q9NST1 481 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 QPCTLQ9NXS2 382 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 EPS15L1Q9UBC2 864 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ZMAT5Q9UDW3 170 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 DCDC2Q9UHG0 476 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 DNAJC16Q9Y2G8 782 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 SNX9Q9Y5X1 595 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ASPDHA6ND91 283 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 MYOGP15173 224 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ZFXP17010 805 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 NDUFV2P19404 249 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ARNTP27540 789 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 HALP42357 657 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 TMBIM6P55061 237 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 TIAL1Q01085 375 aaKnown RBP eCLIP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CTF1Q16619 201 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 FAAH2Q6GMR7 532 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CES5AQ6NT32 575 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 FAM171BQ6P995 826 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 FUNDC1Q8IVP5 155 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 DEFB107AQ8IZN7 70 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PGBD3Q8N328 593 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PDCD6IPQ8WUM4 868 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 TRMT2BQ96GJ1 504 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 NTN4Q9HB63 628 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ALG13Q9NP73 1137 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CCM2LQ9NUG4 571 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 THEGQ9P2T0 379 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CD207Q9UJ71 328 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 COPEO14579 308 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 TPP1O14773 563 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 RASAL1O95294 804 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 DESP17661 470 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 GRIA1P42261 906 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 SEC13P55735 322 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 KDSRQ06136 332 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 CD300CQ08708 224 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 MMRN1Q13201 1228 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 LCN8Q6JVE9 175 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ZYG11AQ6WRX3 759 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 RDH13Q8NBN7 331 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 HLA-CQ95604 372 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 TADA1Q96BN2 335 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF419Q96HQ0 510 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-205ENST00000514271 COX4I2Q96KJ9 171 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 NT5C1AQ9BXI3 368 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 GPR62Q9BZJ7 368 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 C8orf4Q9NR00 106 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 HEY1Q9Y5J3 304 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 CEP350Q5VT06 3117 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 PRORSD1PA6NEY8 169 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 RNF103O00237 685 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 SDHDO14521 159 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 AQP9O43315 295 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 MSL3P1P0C860 447 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 HSD17B1P14061 328 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 LIMK2P53671 638 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ALDH18A1P54886 795 aaKnown RBP7.42□□□□□ -1.22
CLIP1-205ENST00000514271 EIF2B5Q13144 721 aaKnown RBP7.42□□□□□ -1.22
CLIP1-205ENST00000514271 PMS2P3Q13401 168 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 PDK2Q15119 407 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 PLPP4Q5VZY2 271 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 ERMP1Q7Z2K6 904 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 C14orf80Q86SX3 495 aa7.42□□□□□ -1.22
CLIP1-205ENST00000514271 MAFAQ8NHW3 353 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-205ENST00000514271 BCL7CQ8WUZ0 217 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms