RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PIM3Q86V86 326 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 CAMK1DQ8IU85 385 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 ZNF781Q8N8C0 355 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 ZNF557Q8N988 423 aaPredicted RBP14.93□□□□□ -0.02
VCAN-211ENST00000513984 TXNDC5Q8NBS9 432 aaKnown RBP14.93□□□□□ -0.02
VCAN-211ENST00000513984 OR2AP1Q8NGE2 309 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 OR6K2Q8NGY2 324 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 ISG20Q96AZ6 181 aaKnown RBP14.93□□□□□ -0.02
VCAN-211ENST00000513984 SLC7A6OSQ96CW6 309 aaPredicted RBP14.93□□□□□ -0.02
VCAN-211ENST00000513984 UNKQ9C0B0 810 aaKnown RBP14.93□□□□□ -0.02
VCAN-211ENST00000513984 CDH19Q9H159 772 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 IL17CQ9P0M4 197 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 TBC1D14Q9P2M4 693 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 DPP7Q9UHL4 492 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 RAP2CQ9Y3L5 183 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 PIGNO95427 931 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 SERPINA6P08185 405 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 MC4RP32245 332 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 HK2P52789 917 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 NAGLUP54802 743 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 PEX6Q13608 980 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 PTPRRQ15256 657 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 ASTLQ6HA08 431 aaPredicted RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 IRF7Q92985 503 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 ZNF707Q96C28 371 aaPredicted RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 OTUB2Q96DC9 234 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 CCDC126Q96EE4 140 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 PTCD3Q96EY7 689 aaKnown RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 SAMD11Q96NU1 681 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 LBHD1Q9BQE6 289 aaPredicted RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 ILKAPQ9H0C8 392 aaPredicted RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 ATP13A3Q9H7F0 1226 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 SPHK2Q9NRA0 654 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 ARL8BQ9NVJ2 186 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 A0A0J9YYE9 177 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 CAPN14A8MX76 684 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 NEDD8-MDP1E9PL57 170 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 NPHS1O60500 1241 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 SNUPNO95149 360 aaKnown RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 TRBC1P01850 177 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 CHRNGP07510 517 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 ZNF37AP17032 561 aaPredicted RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 SERPINB5P36952 375 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 CTSOP43234 321 aaPredicted RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 TTPAP49638 278 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 SNRPD1P62314 119 aaKnown RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 ELF3P78545 371 aaPredicted RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 PSAPL1Q6NUJ1 521 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 C22orf39Q6P5X5 142 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 CYB5D1Q6P9G0 228 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 PIWIL4Q7Z3Z4 852 aaKnown RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 GRASPQ7Z6J2 395 aaPredicted RBP14.92□□□□□ -0.02
VCAN-211ENST00000513984 KIF2BQ8N4N8 673 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 VOPP1Q96AW1 172 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 EID2BQ96D98 161 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 RILPQ96NA2 401 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 TMEM237Q96Q45 408 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 BBS2Q9BXC9 721 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 TNKS2Q9H2K2 1166 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 POMKQ9H5K3 350 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 SORCS3Q9UPU3 1222 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 PKP3Q9Y446 797 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 HCFC2Q9Y5Z7 792 aa14.92□□□□□ -0.02
VCAN-211ENST00000513984 PLXNB3Q9ULL4 1909 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 PIKFYVEQ9Y2I7 2098 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 UBA6A0AVT1 1052 aaPredicted RBP14.91□□□□□ -0.02
VCAN-211ENST00000513984 ZNF197O14709 1029 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 PFDN6O15212 129 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 NDUFS3O75489 264 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 CA3P07451 260 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 ALPIP09923 528 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 PABPC1P11940 636 aaKnown RBP14.91□□□□□ -0.02
VCAN-211ENST00000513984 CEBPBP17676 345 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 CTPS1P17812 591 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 TFEBP19484 476 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 STK19P49842 368 aaPredicted RBP14.91□□□□□ -0.02
VCAN-211ENST00000513984 IDH3AP50213 366 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 XIAPP98170 497 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 PRKAA1Q13131 559 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 TBCCQ15814 346 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 ARL13AQ5H913 290 aaPredicted RBP14.91□□□□□ -0.02
VCAN-211ENST00000513984 AARS2Q5JTZ9 985 aaKnown RBP14.91□□□□□ -0.02
VCAN-211ENST00000513984 LYSMD3Q7Z3D4 306 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 ISCA2Q86U28 154 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 SPNS2Q8IVW8 549 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 PIANPQ8IYJ0 282 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 LSMEM2Q8N112 164 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 NSL1Q96IY1 281 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 RPL10LQ96L21 214 aaKnown RBP14.91□□□□□ -0.02
VCAN-211ENST00000513984 ZSWIM3Q96MP5 696 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 TUBGCP5Q96RT8 1024 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 GPR63Q9BZJ6 419 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 CEP44Q9C0F1 390 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 BPIFA1Q9NP55 256 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 NCKIPSDQ9NZQ3 722 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 MARK1Q9P0L2 795 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 SLC25A13Q9UJS0 675 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 APOBEC2Q9Y235 224 aaKnown RBP14.91□□□□□ -0.02
VCAN-211ENST00000513984 MED16Q9Y2X0 877 aa14.91□□□□□ -0.02
VCAN-211ENST00000513984 MTF2Q9Y483 593 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms